RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 PTENP60484 403 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 ERVFC1P60507 584 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 ITIH3Q06033 890 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 CES5AQ6NT32 575 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 DDX53Q86TM3 631 aaKnown RBP12.5□□□□□ -0.41
ACTN4-209ENST00000586538 ZBTB8OSQ8IWT0 167 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 FBXO18Q8NFZ0 1043 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 PRIMPOLQ96LW4 560 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 NECTIN4Q96NY8 510 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 LRFN3Q9BTN0 628 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 PHF7Q9BWX1 381 aaPredicted RBP12.5□□□□□ -0.41
ACTN4-209ENST00000586538 C2orf40Q9H1Z8 148 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 TBC1D13Q9NVG8 400 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 DZANK1Q9NVP4 752 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 CLEC1BQ9P126 229 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 DPP7Q9UHL4 492 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 BARX2Q9UMQ3 279 aaPredicted RBP12.5□□□□□ -0.41
ACTN4-209ENST00000586538 INPP5FQ9Y2H2 1132 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 IRAK3Q9Y616 596 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 ZMYM2Q9UBW7 1377 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 LAD1O00515 517 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 PER2O15055 1255 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 OFD1O75665 1012 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 ITGA4P13612 1032 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 ATP2B1P20020 1258 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 TECP42680 631 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 PPP2R5AQ15172 486 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 RABEP1Q15276 862 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 ANKRD54Q6NXT1 300 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 MRPL10Q7Z7H8 261 aaKnown RBP12.49□□□□□ -0.41
ACTN4-209ENST00000586538 NOSTRINQ8IVI9 506 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 VPS52Q8N1B4 723 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 MRPL43Q8N983 215 aaKnown RBP12.49□□□□□ -0.41
ACTN4-209ENST00000586538 IGSF21Q96ID5 467 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 POLR3CQ9BUI4 534 aaPredicted RBP12.49□□□□□ -0.41
ACTN4-209ENST00000586538 EMILIN2Q9BXX0 1053 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 BMP2KQ9NSY1 1161 aaPredicted RBP12.49□□□□□ -0.41
ACTN4-209ENST00000586538 HCSTQ9UBK5 93 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 DBR1Q9UK59 544 aaKnown RBP12.49□□□□□ -0.41
ACTN4-209ENST00000586538 NR2E1Q9Y466 385 aa12.49□□□□□ -0.41
ACTN4-209ENST00000586538 USP15Q9Y4E8 981 aaPredicted RBP12.49□□□□□ -0.41
ACTN4-209ENST00000586538 PHLPP2Q6ZVD8 1323 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-209ENST00000586538 POTEMA6NI47 508 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 GLP2RO95838 553 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 ALDH2P05091 517 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 CTSAP10619 480 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 RPA1P27694 616 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 CBX2Q14781 532 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-209ENST00000586538 HERC4Q5GLZ8 1057 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-209ENST00000586538 TTC38Q5R3I4 469 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 APBB1IPQ7Z5R6 666 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-209ENST00000586538 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
ACTN4-209ENST00000586538 LPPQ93052 612 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 RIPOR3Q96MK2 946 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 ZBP1Q9H171 429 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 CSRNP2Q9H175 543 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 CD320Q9NPF0 282 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 XPNPEP1Q9NQW7 623 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 PRMT7Q9NVM4 692 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-209ENST00000586538 GIT1Q9Y2X7 761 aa12.48□□□□□ -0.41
ACTN4-209ENST00000586538 ARHGEF35A5YM69 484 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 C2orf71A6NGG8 1288 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 TSPAN1O60635 241 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 USO1O60763 962 aaKnown RBP12.47□□□□□ -0.41
ACTN4-209ENST00000586538 CXCL14O95715 111 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 GALTP07902 379 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 HOXA11P31270 313 aaPredicted RBP12.47□□□□□ -0.41
ACTN4-209ENST00000586538 ARL2P36404 184 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 PBX3P40426 434 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 MCM2P49736 904 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 CAPSQ13938 189 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 TMEM132AQ24JP5 1023 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 SLC27A1Q6PCB7 646 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 AGMOQ6ZNB7 445 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 CATSPER3Q86XQ3 398 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 PIGOQ8TEQ8 1089 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 SUSD6Q92537 303 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 FAM122AQ96E09 287 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 ADPGKQ9BRR6 497 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 GBP3Q9H0R5 595 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 POLR3FQ9H1D9 316 aaPredicted RBP12.47□□□□□ -0.41
ACTN4-209ENST00000586538 KCNH6Q9H252 994 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 NRDE2Q9H7Z3 1164 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 MINDY3Q9H8M7 445 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 FAN1Q9Y2M0 1017 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 IPPQ9Y573 584 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 HCFC2Q9Y5Z7 792 aa12.47□□□□□ -0.41
ACTN4-209ENST00000586538 LRRIQ4A6NIV6 560 aa12.46□□□□□ -0.41
ACTN4-209ENST00000586538 HIDE1A8MVS5 230 aa12.46□□□□□ -0.41
ACTN4-209ENST00000586538 NT5C1B-RDH14C9J2C7 533 aa12.46□□□□□ -0.41
ACTN4-209ENST00000586538 INPPL1O15357 1258 aa12.46□□□□□ -0.41
ACTN4-209ENST00000586538 SEC24BO95487 1268 aa12.46□□□□□ -0.41
ACTN4-209ENST00000586538 URODP06132 367 aa12.46□□□□□ -0.41
ACTN4-209ENST00000586538 MTHFRP42898 656 aa12.46□□□□□ -0.41
ACTN4-209ENST00000586538 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.419e-7■■■■□ 23.3
ACTN4-209ENST00000586538 GUCY1B3Q02153 619 aa12.46□□□□□ -0.41
ACTN4-209ENST00000586538 MBTD1Q05BQ5 628 aa12.46□□□□□ -0.41
ACTN4-209ENST00000586538 ST3GAL1Q11201 340 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms