RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ZNF333Q96JL9 665 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 TUT1Q9H6E5 874 aaKnown RBP22.35■■□□□ 1.17
ATG4D-204ENST00000586417 KMT5AQ9NQR1 393 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 PRDM10Q9NQV6 1147 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 ERAP1Q9NZ08 941 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 CGNQ9P2M7 1197 aaKnown RBP22.35■■□□□ 1.17
ATG4D-204ENST00000586417 TBX20Q9UMR3 447 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 MSCO60682 206 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 CYP2J2P51589 502 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 PURAQ00577 322 aaKnown RBP22.35■■□□□ 1.17
ATG4D-204ENST00000586417 BRDTQ58F21 947 aaPredicted RBP22.35■■□□□ 1.17
ATG4D-204ENST00000586417 CCSAPQ6IQ19 270 aaPredicted RBP22.35■■□□□ 1.17
ATG4D-204ENST00000586417 FAM167AQ96KS9 214 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 C16orf45Q96MC5 204 aaPredicted RBP22.35■■□□□ 1.17
ATG4D-204ENST00000586417 DEFB118Q96PH6 123 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 MMRN2Q9H8L6 949 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 FAM207AQ9NSI2 230 aaPredicted RBP22.35■■□□□ 1.17
ATG4D-204ENST00000586417 DENND3A2RUS2 1198 aa22.34■■□□□ 1.17
ATG4D-204ENST00000586417 RFC5P40937 340 aa22.34■■□□□ 1.17
ATG4D-204ENST00000586417 CHMP4BP1P59074 171 aa22.34■■□□□ 1.17
ATG4D-204ENST00000586417 KCNA10Q16322 511 aa22.34■■□□□ 1.17
ATG4D-204ENST00000586417 WDR59Q6PJI9 974 aa22.34■■□□□ 1.17
ATG4D-204ENST00000586417 CXCL17Q6UXB2 119 aa22.34■■□□□ 1.17
ATG4D-204ENST00000586417 TMTC1Q8IUR5 882 aa22.34■■□□□ 1.17
ATG4D-204ENST00000586417 F2P00734 622 aa22.33■■□□□ 1.17
ATG4D-204ENST00000586417 AFPP02771 609 aaKnown RBP22.33■■□□□ 1.17
ATG4D-204ENST00000586417 ARL2P36404 184 aa22.33■■□□□ 1.17
ATG4D-204ENST00000586417 SNRPFP62306 86 aaKnown RBP22.33■■□□□ 1.17
ATG4D-204ENST00000586417 MEA1Q16626 185 aa22.33■■□□□ 1.17
ATG4D-204ENST00000586417 ATP8B4Q8TF62 1192 aa22.33■■□□□ 1.17
ATG4D-204ENST00000586417 KCNN1Q92952 543 aa22.33■■□□□ 1.17
ATG4D-204ENST00000586417 TMEM143Q96AN5 459 aa22.33■■□□□ 1.17
ATG4D-204ENST00000586417 ARMC5Q96C12 935 aa22.33■■□□□ 1.17
ATG4D-204ENST00000586417 ARHGAP28Q9P2N2 729 aa22.33■■□□□ 1.17
ATG4D-204ENST00000586417 PPP2R2CQ9Y2T4 447 aa22.33■■□□□ 1.17
ATG4D-204ENST00000586417 ZBTB42B2RXF5 422 aa22.33■■□□□ 1.16
ATG4D-204ENST00000586417 SLC26A2P50443 739 aa22.33■■□□□ 1.16
ATG4D-204ENST00000586417 CYP26C1Q6V0L0 522 aa22.33■■□□□ 1.16
ATG4D-204ENST00000586417 REXO1L1PQ8IX06 675 aa22.33■■□□□ 1.16
ATG4D-204ENST00000586417 ASAP3Q8TDY4 903 aa22.33■■□□□ 1.16
ATG4D-204ENST00000586417 SLC7A3Q8WY07 619 aa22.33■■□□□ 1.16
ATG4D-204ENST00000586417 BBXQ8WY36 941 aaPredicted RBP22.33■■□□□ 1.16
ATG4D-204ENST00000586417 IFT74Q96LB3 600 aa22.33■■□□□ 1.16
ATG4D-204ENST00000586417 CBWD1Q9BRT8 395 aa22.33■■□□□ 1.16
ATG4D-204ENST00000586417 ZNF215Q9UL58 517 aaPredicted RBP22.33■■□□□ 1.16
ATG4D-204ENST00000586417 TRPC6Q9Y210 931 aa22.33■■□□□ 1.16
ATG4D-204ENST00000586417 FRMD4BQ9Y2L6 1034 aa22.33■■□□□ 1.16
ATG4D-204ENST00000586417 PPME1Q9Y570 386 aa22.33■■□□□ 1.16
ATG4D-204ENST00000586417 MAFO75444 373 aaPredicted RBP22.32■■□□□ 1.16
ATG4D-204ENST00000586417 NOL4O94818 638 aa22.32■■□□□ 1.16
ATG4D-204ENST00000586417 ASGR1P07306 291 aa22.32■■□□□ 1.16
ATG4D-204ENST00000586417 CST5P28325 142 aaPredicted RBP22.32■■□□□ 1.16
ATG4D-204ENST00000586417 KIAA0753Q2KHM9 967 aa22.32■■□□□ 1.16
ATG4D-204ENST00000586417 DCAF17Q5H9S7 520 aaPredicted RBP22.32■■□□□ 1.16
ATG4D-204ENST00000586417 DNTTIP2Q5QJE6 756 aaKnown RBP22.32■■□□□ 1.16
ATG4D-204ENST00000586417 TAS1R3Q7RTX0 852 aa22.32■■□□□ 1.16
ATG4D-204ENST00000586417 TRAPPC12Q8WVT3 735 aa22.32■■□□□ 1.16
ATG4D-204ENST00000586417 EDEM3Q9BZQ6 932 aa22.32■■□□□ 1.16
ATG4D-204ENST00000586417 EXOC7Q9UPT5 735 aa22.32■■□□□ 1.16
ATG4D-204ENST00000586417 CCP110O43303 1012 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 EXOC3O60645 756 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 GLRA2P23416 452 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 DPY19L2P1Q6NXN4 242 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 RNF180Q86T96 592 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 NEK11Q8NG66 645 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 BAP1Q92560 729 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 ZBTB10Q96DT7 871 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 CHP1Q99653 195 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 CRACR2AQ9BSW2 395 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 DESI2Q9BSY9 194 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 KAT6AQ92794 2004 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 SCN10AQ9Y5Y9 1956 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 SIP14410 1827 aa22.31■■□□□ 1.16
ATG4D-204ENST00000586417 ANKRD63C9JTQ0 380 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 INSRRP14616 1297 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 ADSSP30520 456 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 HNRNPH3P31942 346 aaKnown RBP22.3■■□□□ 1.16
ATG4D-204ENST00000586417 MFSD10Q14728 455 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 LSM14BQ9BX40 385 aaKnown RBP22.3■■□□□ 1.16
ATG4D-204ENST00000586417 MCOLN1Q9GZU1 580 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 PCIF1Q9H4Z3 704 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 HSPBP1Q9NZL4 362 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 HAS3O00219 553 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 ZSCAN12O43309 604 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 PSEN2P49810 448 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 TCERG1LQ5VWI1 586 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 SLC39A4Q6P5W5 647 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 ZNF397Q8NF99 534 aaPredicted RBP22.3■■□□□ 1.16
ATG4D-204ENST00000586417 KCNG1Q9UIX4 513 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 ADGRG1Q9Y653 693 aa22.3■■□□□ 1.16
ATG4D-204ENST00000586417 KIAA0100Q14667 2235 aaKnown RBP22.29■■□□□ 1.16
ATG4D-204ENST00000586417 H0YCG3 227 aa22.29■■□□□ 1.16
ATG4D-204ENST00000586417 ZEB2O60315 1214 aa22.29■■□□□ 1.16
ATG4D-204ENST00000586417 HBP1O60381 514 aa22.29■■□□□ 1.16
ATG4D-204ENST00000586417 KPNA6O60684 536 aa22.29■■□□□ 1.16
ATG4D-204ENST00000586417 TNNT1P13805 278 aa22.29■■□□□ 1.16
ATG4D-204ENST00000586417 NAMPTP43490 491 aa22.29■■□□□ 1.16
ATG4D-204ENST00000586417 IGBP1P78318 339 aa22.29■■□□□ 1.16
ATG4D-204ENST00000586417 PPP2R5AQ15172 486 aa22.29■■□□□ 1.16
ATG4D-204ENST00000586417 PTPN14Q15678 1187 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms