RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	SYCE3	A1L190	88 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	GPR182	O15218	404 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	EVI5	O60447	810 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	CSDE1	O75534	798 aa	Known RBP	18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	ERLIN2	O94905	339 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	PIGR	P01833	764 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	RAG1	P15918	1043 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	RFC2	P35250	354 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	PRCP	P42785	496 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	CCL23	P55773	120 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	STIM1	Q13586	685 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	CATSPER4	Q7RTX7	472 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	ADSSL1	Q8N142	457 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	MLKL	Q8NB16	471 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	MRPL4	Q9BYD3	311 aa	Known RBP	18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	OSBPL7	Q9BZF2	842 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	ERVK-5	Q9HDB9	667 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	ANO10	Q9NW15	660 aa		18.3	■□□□□ 0.52
TCF3-208	ENST00000586318	CNTNAP2	Q9UHC6	1331 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	TSPAN1	O60635	241 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	NBN	O60934	754 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	FGFR4	P22455	802 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	ITGB8	P26012	769 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	HOXD13	P35453	343 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	KCNA1	Q09470	495 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	PAK2	Q13177	524 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	PRPF4B	Q13523	1007 aa	Known RBP	18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	GPNMB	Q14956	572 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	STX1A	Q16623	288 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	ZPBP2	Q6X784	338 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	SCLY	Q96I15	445 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	FUCA2	Q9BTY2	467 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	AGO3	Q9H9G7	860 aa	Known RBP	18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	ST3GAL5	Q9UNP4	418 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	MAPK8IP1	Q9UQF2	711 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	ZMYM2	Q9UBW7	1377 aa		18.29	■□□□□ 0.52
TCF3-208	ENST00000586318	PPP1R3G	B7ZBB8	358 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	B4GALT5	O43286	388 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	CXCL10	P02778	98 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	EDN1	P05305	212 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	CCDC192	P0DO97	292 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	CD44	P16070	742 aa	Known RBP	18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	AXL	P30530	894 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	CD52	P31358	61 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	TYRO3	Q06418	890 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	NCBP1	Q09161	790 aa	Known RBP	18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	KNOP1	Q1ED39	458 aa	Known RBP	18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	DPCR1	Q3MIW9	517 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	MFSD5	Q6N075	450 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	FAM43B	Q6ZT52	329 aa	Predicted RBP	18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	NELFCD	Q8IXH7	590 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	SYCP3	Q8IZU3	236 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	TMEM199	Q8N511	208 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	DPF3	Q92784	378 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	DHTKD1	Q96HY7	919 aa	Predicted RBP	18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	TARS2	Q9BW92	718 aa	Known RBP	18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	AGPAT5	Q9NUQ2	364 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	DACH1	Q9UI36	760 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	PADI3	Q9ULW8	664 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	SCN5A	Q14524	2016 aa		18.28	■□□□□ 0.52
TCF3-208	ENST00000586318	PSMA7	O14818	248 aa		18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	ARF4	P18085	180 aa	Predicted RBP	18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	LIG4	P49917	911 aa		18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	SNRPF	P62306	86 aa	Known RBP	18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	NFX1	Q12986	1120 aa	Known RBP	18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	PLEKHG4	Q58EX7	1191 aa		18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	CT47A1	Q5JQC4	288 aa	Predicted RBP	18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	BICD1	Q96G01	975 aa		18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	ACO2	Q99798	780 aa	Known RBP	18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	IFIH1	Q9BYX4	1025 aa	Known RBP	18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	GBP3	Q9H0R5	595 aa		18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	GZF1	Q9H116	711 aa	Predicted RBP	18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	KCTD10	Q9H3F6	313 aa		18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	CHST12	Q9NRB3	414 aa		18.27	■□□□□ 0.52
TCF3-208	ENST00000586318	LTBP2	Q14767	1821 aa		18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	TTLL13P	A6NNM8	815 aa		18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	HNRNPDL	O14979	420 aa	Known RBP	18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	HOXA11	P31270	313 aa	Predicted RBP	18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	TMEM132A	Q24JP5	1023 aa		18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	ATF7IP2	Q5U623	682 aa		18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	CENPP	Q6IPU0	288 aa		18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	SEPT8	Q92599	483 aa		18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	APBB2	Q92870	758 aa		18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	CCDC51	Q96ER9	411 aa		18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	CPB2	Q96IY4	423 aa		18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	TYW1	Q9NV66	732 aa	Known RBP	18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	CGN	Q9P2M7	1197 aa	Known RBP	18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	PIN4	Q9Y237	131 aa	Known RBP	18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	TNFSF13B	Q9Y275	285 aa		18.26	■□□□□ 0.51
TCF3-208	ENST00000586318	USP20	Q9Y2K6	914 aa		18.26	■□□□□ 0.51
TCF3-208	ENST00000586318		A0A1B0GUA9	196 aa		18.25	■□□□□ 0.51
TCF3-208	ENST00000586318	PDXK	O00764	312 aa		18.25	■□□□□ 0.51
TCF3-208	ENST00000586318	N4BP3	O15049	544 aa		18.25	■□□□□ 0.51
TCF3-208	ENST00000586318	TGFB1I1	O43294	461 aa		18.25	■□□□□ 0.51
TCF3-208	ENST00000586318	TOM1L1	O75674	476 aa		18.25	■□□□□ 0.51
TCF3-208	ENST00000586318	PFKM	P08237	780 aa		18.25	■□□□□ 0.51
TCF3-208	ENST00000586318	PROZ	P22891	400 aa		18.25	■□□□□ 0.51
TCF3-208	ENST00000586318	CCNE1	P24864	410 aa		18.25	■□□□□ 0.51
TCF3-208	ENST00000586318	PAK1	Q13153	545 aa		18.25	■□□□□ 0.51
TCF3-208	ENST00000586318	KLHL10	Q6JEL2	608 aa		18.25	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms