RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 KIF20AO95235 890 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 AXLP30530 894 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 PRPF4BQ13523 1007 aaKnown RBP14.97□□□□□ -0.01
VMP1-203ENST00000586245 GPNMBQ14956 572 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 ZC2HC1CQ53FD0 456 aaPredicted RBP14.97□□□□□ -0.01
VMP1-203ENST00000586245 PLEKHG4Q58EX7 1191 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 L1TD1Q5T7N2 865 aaKnown RBP14.97□□□□□ -0.01
VMP1-203ENST00000586245 FAM43BQ6ZT52 329 aaPredicted RBP14.97□□□□□ -0.01
VMP1-203ENST00000586245 APBB2Q92870 758 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 KCNN1Q92952 543 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 BICD1Q96G01 975 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 ACCSQ96QU6 501 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 MRPL4Q9BYD3 311 aaKnown RBP14.97□□□□□ -0.01
VMP1-203ENST00000586245 OSBPL7Q9BZF2 842 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 IL23AQ9NPF7 189 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 TMEM63CQ9P1W3 806 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 EXOC7Q9UPT5 735 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 PIN4Q9Y237 131 aaKnown RBP14.97□□□□□ -0.01
VMP1-203ENST00000586245 UBE4BO95155 1302 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 BIN1O00499 593 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 TSPAN1O60635 241 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 PPP1R37O75864 691 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 ZSCAN20P17040 1043 aaPredicted RBP14.96□□□□□ -0.01
VMP1-203ENST00000586245 CASP5P51878 434 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 STK4Q13043 487 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 AMHR2Q16671 573 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 ZNF658Q5TYW1 1059 aaPredicted RBP14.96□□□□□ -0.01
VMP1-203ENST00000586245 ISM2Q6H9L7 571 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 CNKSR3Q6P9H4 555 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 TAS1R3Q7RTX0 852 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 MAP4K3Q8IVH8 894 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 SYCP3Q8IZU3 236 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 TRIML1Q8N9V2 468 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 DBF4BQ8NFT6 615 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 STRA6Q9BX79 667 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 FTHL17Q9BXU8 183 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 FGFBP2Q9BYJ0 223 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 TMEM206Q9H813 350 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 CHST12Q9NRB3 414 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 GDAQ9Y2T3 454 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 SIP14410 1827 aa14.96□□□□□ -0.01
VMP1-203ENST00000586245 CNTNAP2Q9UHC6 1331 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 B4GALT5O43286 388 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 PRPF6O94906 941 aaKnown RBP14.95□□□□□ -0.02
VMP1-203ENST00000586245 LETM1O95202 739 aaPredicted RBP14.95□□□□□ -0.02
VMP1-203ENST00000586245 ACTN1P12814 892 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 LIG4P49917 911 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 MLLT1Q03111 559 aaPredicted RBP14.95□□□□□ -0.02
VMP1-203ENST00000586245 STIM1Q13586 685 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 MORC3Q14149 939 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 NOTUMQ6P988 496 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 EPM2AIP1Q7L775 607 aaPredicted RBP14.95□□□□□ -0.02
VMP1-203ENST00000586245 MYOCDQ8IZQ8 938 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 KIAA0895Q8NCT3 520 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 GLIS3Q8NEA6 775 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 ZNF507Q8TCN5 953 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 CPB2Q96IY4 423 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 AGPAT5Q9NUQ2 364 aa14.95□□□□□ -0.02
VMP1-203ENST00000586245 HNRNPDLO14979 420 aaKnown RBP14.94□□□□□ -0.02
VMP1-203ENST00000586245 N4BP3O15049 544 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 PIGRP01833 764 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 ACRP10323 421 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 ARF4P18085 180 aaPredicted RBP14.94□□□□□ -0.02
VMP1-203ENST00000586245 PPP1R2P41236 205 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 IKBKEQ14164 716 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 ATF7IP2Q5U623 682 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 TWF2Q6IBS0 349 aaKnown RBP14.94□□□□□ -0.02
VMP1-203ENST00000586245 PSRC1Q6PGN9 363 aaPredicted RBP14.94□□□□□ -0.02
VMP1-203ENST00000586245 SASS6Q6UVJ0 657 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 ZPBP2Q6X784 338 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 RBM43Q6ZSC3 357 aaKnown RBP14.94□□□□□ -0.02
VMP1-203ENST00000586245 APBB1IPQ7Z5R6 666 aaPredicted RBP14.94□□□□□ -0.02
VMP1-203ENST00000586245 NELFCDQ8IXH7 590 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 SMYD4Q8IYR2 804 aaPredicted RBP14.94□□□□□ -0.02
VMP1-203ENST00000586245 SCFD1Q8WVM8 642 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 CCDC51Q96ER9 411 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 ACO2Q99798 780 aaKnown RBP14.94□□□□□ -0.02
VMP1-203ENST00000586245 ADPGKQ9BRR6 497 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 TARS2Q9BW92 718 aaKnown RBP14.94□□□□□ -0.02
VMP1-203ENST00000586245 PCDH10Q9P2E7 1040 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 TNFSF13BQ9Y275 285 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 LTBP2Q14767 1821 aa14.94□□□□□ -0.02
VMP1-203ENST00000586245 EFCAB14O75071 495 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 FGBP02675 491 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 EDN1P05305 212 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 HOXA11P31270 313 aaPredicted RBP14.93□□□□□ -0.02
VMP1-203ENST00000586245 MATR3P43243 847 aaKnown RBP eCLIP14.93□□□□□ -0.02
VMP1-203ENST00000586245 KCNA1Q09470 495 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 KNOP1Q1ED39 458 aaKnown RBP14.93□□□□□ -0.02
VMP1-203ENST00000586245 BMT2Q1RMZ1 405 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 COBLL1Q53SF7 1204 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 SLC27A1Q6PCB7 646 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 GUF1Q8N442 669 aaKnown RBP14.93□□□□□ -0.02
VMP1-203ENST00000586245 ADAM2Q99965 735 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 TCHPQ9BT92 498 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 GBP3Q9H0R5 595 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 TMX1Q9H3N1 280 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 C1orf112Q9NSG2 853 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 MAPK8IP1Q9UQF2 711 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 USP20Q9Y2K6 914 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms