RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 SMIM10L2AP0DMW4 78 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 SMIM10L2BP0DMW5 78 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
UBBP4-202ENST00000584755 ELNP15502 786 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 TMOD1P28289 359 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 PRMT2P55345 433 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 ENPEPQ07075 957 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 KCNMA1Q12791 1236 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 ARHGEF6Q15052 776 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 ZPBP2Q6X784 338 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 INTS8Q75QN2 995 aaKnown RBP15.28■□□□□ 0.04
UBBP4-202ENST00000584755 RHPN2Q8IUC4 686 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 CNGA4Q8IV77 575 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 ZBTB8OSQ8IWT0 167 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 METTL13Q8N6R0 699 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 ZNF296Q8WUU4 475 aaPredicted RBP15.28■□□□□ 0.04
UBBP4-202ENST00000584755 LMBR1Q8WVP7 490 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 EVPLQ92817 2033 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 ZBTB10Q96DT7 871 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 CCDC51Q96ER9 411 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 PCIF1Q9H4Z3 704 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 A0A1W2PQJ5 194 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 GTPBP10A4D1E9 387 aaKnown RBP15.27■□□□□ 0.04
UBBP4-202ENST00000584755 MYADML2A6NDP7 307 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 MYL3P08590 195 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 RARBP10826 455 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 FECHP22830 423 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 CCND3P30281 292 aaPredicted RBP15.27■□□□□ 0.04
UBBP4-202ENST00000584755 CASP14P31944 242 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 FXR1P51114 621 aaKnown RBP eCLIP15.27■□□□□ 0.04
UBBP4-202ENST00000584755 BFSP1Q12934 665 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 KIAA0319LQ8IZA0 1049 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 CCDC112Q8NEF3 446 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 PANX2Q96RD6 677 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 FZD8Q9H461 694 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 SETD4Q9NVD3 440 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 CAPN11Q9UMQ6 739 aa15.27■□□□□ 0.04
UBBP4-202ENST00000584755 SCN10AQ9Y5Y9 1956 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 KAT6AQ92794 2004 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 SMIM35A0A1B0GVV1 85 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 TTC26A0AVF1 554 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 RNF225M0QZC1 329 aaPredicted RBP15.27■□□□□ 0.03
UBBP4-202ENST00000584755 GJB1P08034 283 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 TPM1P09493 284 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 C6orf222P0C671 652 aaPredicted RBP15.27■□□□□ 0.03
UBBP4-202ENST00000584755 SRGAP2CP0DJJ0 459 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 CST5P28325 142 aaPredicted RBP15.27■□□□□ 0.03
UBBP4-202ENST00000584755 KLK7P49862 253 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 LIG4P49917 911 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 ADKP55263 362 aaKnown RBP15.27■□□□□ 0.03
UBBP4-202ENST00000584755 MBTD1Q05BQ5 628 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 FAM187BQ17R55 369 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 SLFN12LQ6IEE8 588 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 NFRKBQ6P4R8 1299 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 TMEM139Q8IV31 216 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 CCDC155Q8N6L0 562 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 ZSWIM2Q8NEG5 633 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 KLHDC9Q8NEP7 349 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 BICD1Q96G01 975 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 MRPL4Q9BYD3 311 aaKnown RBP15.27■□□□□ 0.03
UBBP4-202ENST00000584755 EDEM3Q9BZQ6 932 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 IFT122Q9HBG6 1241 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 SPC25Q9HBM1 224 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 KIAA1586Q9HCI6 787 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 PYCARDQ9ULZ3 195 aa15.27■□□□□ 0.03
UBBP4-202ENST00000584755 A0A0B4J269 797 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 ACKR2O00590 384 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 PRKCBP05771 671 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 ADRB2P07550 413 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 SKILP12757 684 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 PHKA2P46019 1235 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 KCNJ6P48051 423 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 CDC42EP1Q00587 391 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 GOLGA8FQ08AF8 430 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 GOLGA8DPQ0D2H9 430 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 HIC1Q14526 733 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 HSP90AA2PQ14568 343 aaPredicted RBP15.26■□□□□ 0.03
UBBP4-202ENST00000584755 SNRNP35Q16560 246 aaKnown RBP15.26■□□□□ 0.03
UBBP4-202ENST00000584755 MAPK6Q16659 721 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 DCAF17Q5H9S7 520 aaPredicted RBP15.26■□□□□ 0.03
UBBP4-202ENST00000584755 DPY19L2P1Q6NXN4 242 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 ZNF410Q86VK4 478 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 GPD1LQ8N335 351 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 KIAA1524Q8TCG1 905 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 RAET1EQ8TD07 263 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 POMGNT1Q8WZA1 660 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 MFSD14AQ96MC6 490 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 NLRP4Q96MN2 994 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 MAP7D2Q96T17 732 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 ACO2Q99798 780 aaKnown RBP15.26■□□□□ 0.03
UBBP4-202ENST00000584755 MTG1Q9BT17 334 aaPredicted RBP15.26■□□□□ 0.03
UBBP4-202ENST00000584755 TARS2Q9BW92 718 aaKnown RBP15.26■□□□□ 0.03
UBBP4-202ENST00000584755 HAPLN2Q9GZV7 340 aa15.26■□□□□ 0.03
UBBP4-202ENST00000584755 ABLIM1O14639 778 aa15.25■□□□□ 0.03
UBBP4-202ENST00000584755 PMM2O15305 246 aa15.25■□□□□ 0.03
UBBP4-202ENST00000584755 EXTL3O43909 919 aa15.25■□□□□ 0.03
UBBP4-202ENST00000584755 ZEB2O60315 1214 aa15.25■□□□□ 0.03
UBBP4-202ENST00000584755 PGK1P00558 417 aa15.25■□□□□ 0.03
UBBP4-202ENST00000584755 KRT13P13646 458 aa15.25■□□□□ 0.03
UBBP4-202ENST00000584755 TRIM21P19474 475 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms