RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 RIC8AQ9NPQ8 531 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 RBM28Q9NW13 759 aaKnown RBP11.49□□□□□ -0.57
GGA3-219ENST00000584550 TCEAL9Q9UHQ7 104 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 USP18Q9UMW8 372 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 MTF2Q9Y483 593 aaPredicted RBP11.49□□□□□ -0.57
GGA3-219ENST00000584550 NUMBLQ9Y6R0 609 aa11.49□□□□□ -0.57
GGA3-219ENST00000584550 GPR179Q6PRD1 2367 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 SMCO2A6NFE2 343 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 LAMTOR5O43504 91 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 FOSP01100 380 aaPredicted RBP11.48□□□□□ -0.57
GGA3-219ENST00000584550 ALDH2P05091 517 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 PSAPP07602 524 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 LAMP2P13473 410 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 ADD1P35611 737 aaKnown RBP11.48□□□□□ -0.57
GGA3-219ENST00000584550 ADCY7P51828 1080 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 GPC5P78333 572 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 CCT2P78371 535 aaKnown RBP11.48□□□□□ -0.57
GGA3-219ENST00000584550 STK3Q13188 491 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 TOB2Q14106 344 aaPredicted RBP11.48□□□□□ -0.57
GGA3-219ENST00000584550 TSSK4Q6SA08 328 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 PALB2Q86YC2 1186 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 FAM193BQ96PV7 902 aaPredicted RBP11.48□□□□□ -0.57
GGA3-219ENST00000584550 PIN4Q9Y237 131 aaKnown RBP11.48□□□□□ -0.57
GGA3-219ENST00000584550 FAN1Q9Y2M0 1017 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 PCDHA10Q9Y5I2 948 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 V9GY48 417 aaPredicted RBP11.48□□□□□ -0.57
GGA3-219ENST00000584550 MIA3Q5JRA6 1907 aa11.48□□□□□ -0.57
GGA3-219ENST00000584550 CHD6Q8TD26 2715 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 DOCK8Q8NF50 2099 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 A0A087WZ62 844 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 TEX28O15482 410 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 GLUD1P00367 558 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 POMCP01189 267 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 CD72P21854 359 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 PDIA3P30101 505 aaKnown RBP11.47□□□□□ -0.57
GGA3-219ENST00000584550 SREBF1P36956 1147 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 STARD6P59095 220 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 ANAPC15P60006 121 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 HTR4Q13639 388 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 UBXN2BQ14CS0 331 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 JAKMIP3Q5VZ66 844 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 GLYCTKQ8IVS8 523 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 GPR161Q8N6U8 529 aaKnown RBP11.47□□□□□ -0.57
GGA3-219ENST00000584550 CMASQ8NFW8 434 aaPredicted RBP11.47□□□□□ -0.57
GGA3-219ENST00000584550 SECISBP2LQ93073 1101 aaKnown RBP11.47□□□□□ -0.57
GGA3-219ENST00000584550 NXPE3Q969Y0 559 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 SH2D3AQ9BRG2 576 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 FDXACB1Q9BRP7 624 aaPredicted RBP11.47□□□□□ -0.57
GGA3-219ENST00000584550 BCO2Q9BYV7 579 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 GCOM2Q9BZD3 368 aaPredicted RBP11.47□□□□□ -0.57
GGA3-219ENST00000584550 NCOA5Q9HCD5 579 aaKnown RBP11.47□□□□□ -0.57
GGA3-219ENST00000584550 SLC2A4RGQ9NR83 387 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 CHST12Q9NRB3 414 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 NRBP2Q9NSY0 501 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
GGA3-219ENST00000584550 FAM105AQ9NUU6 356 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 CHD8Q9HCK8 2581 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 WDR81Q562E7 1941 aa11.47□□□□□ -0.57
GGA3-219ENST00000584550 CNTNAP5Q8WYK1 1306 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 IGLV3-22A0A075B6J6 115 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 CCDC196A0A1B0GTZ2 297 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 KANSL1LA0AUZ9 987 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 FAM170BA6NMN3 283 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 PRR5-ARHGAP8B1AHC4 643 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 ANHXE9PGG2 379 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 NRP1O14786 923 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 ZNF862O60290 1169 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 OATP04181 439 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 URODP06132 367 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 ADH1AP07327 375 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 ADRB1P08588 477 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 KCNA4P22459 653 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 NEK4P51957 841 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 ARHGAP8P85298 464 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 LMNB2Q03252 620 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 LPAL2Q16609 132 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 ZNF528Q3MIS6 628 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 ZNF746Q6NUN9 644 aaPredicted RBP11.46□□□□□ -0.57
GGA3-219ENST00000584550 PARM1Q6UWI2 310 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 NIPA1Q7RTP0 329 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 KSR1Q8IVT5 923 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 SMAP1Q8IYB5 467 aaPredicted RBP11.46□□□□□ -0.57
GGA3-219ENST00000584550 FBXL16Q8N461 479 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 URGCPQ8TCY9 931 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 FGF14Q92915 247 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 PHKBQ93100 1093 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 ZNF707Q96C28 371 aaPredicted RBP11.46□□□□□ -0.57
GGA3-219ENST00000584550 SHDQ96IW2 340 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 FAM167AQ96KS9 214 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 B3GALT6Q96L58 329 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 RPS6KC1Q96S38 1066 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 RTKNQ9BST9 563 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 AGXT2Q9BYV1 514 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 TBC1D22BQ9NU19 505 aa11.46□□□□□ -0.57
GGA3-219ENST00000584550 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.46□□□□□ -0.57
GGA3-219ENST00000584550 SMG5Q9UPR3 1016 aaKnown RBP11.46□□□□□ -0.57
GGA3-219ENST00000584550 PRG3Q9Y2Y8 225 aaPredicted RBP11.46□□□□□ -0.57
GGA3-219ENST00000584550 MYH15Q9Y2K3 1946 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 PATJQ8NI35 1801 aa11.45□□□□□ -0.58
GGA3-219ENST00000584550 CARNS1A5YM72 827 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms