RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 FZD8Q9H461 694 aa30.02■■■□□ 2.4
SMARCD2-210ENST00000584400 KANSL3Q9P2N6 904 aa30.02■■■□□ 2.4
SMARCD2-210ENST00000584400 ITGB1P05556 798 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 GUCY2CP25092 1073 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 PTPAQ15257 358 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 TMEM132AQ24JP5 1023 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 TMEM119Q4V9L6 283 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 NOMO2Q5JPE7 1267 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 LRRC55Q6ZSA7 311 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 C1orf186Q6ZWK4 172 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 KCNK18Q7Z418 384 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 SPPL3Q8TCT6 385 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 BSNDQ8WZ55 320 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 PLIN2Q99541 437 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 RSAD1Q9HA92 442 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 PUF60Q9UHX1 559 aaKnown RBP30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 MORC2Q9Y6X9 1032 aaPredicted RBP30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 MYO9BQ13459 2157 aa30.01■■■□□ 2.39
SMARCD2-210ENST00000584400 A0A1B0GUA9 196 aa30■■■□□ 2.39
SMARCD2-210ENST00000584400 PLA2G4BP0C869 781 aa30■■■□□ 2.39
SMARCD2-210ENST00000584400 ITGA4P13612 1032 aa30■■■□□ 2.39
SMARCD2-210ENST00000584400 ALDH7A1P49419 539 aaKnown RBP30■■■□□ 2.39
SMARCD2-210ENST00000584400 MRPS5P82675 430 aaKnown RBP30■■■□□ 2.39
SMARCD2-210ENST00000584400 DMP1Q13316 513 aaPredicted RBP30■■■□□ 2.39
SMARCD2-210ENST00000584400 FAM173BQ6P4H8 233 aa30■■■□□ 2.39
SMARCD2-210ENST00000584400 SLC27A1Q6PCB7 646 aa30■■■□□ 2.39
SMARCD2-210ENST00000584400 KCNT2Q6UVM3 1135 aa30■■■□□ 2.39
SMARCD2-210ENST00000584400 ZNF396Q96N95 335 aaPredicted RBP30■■■□□ 2.39
SMARCD2-210ENST00000584400 RUSC1Q9BVN2 902 aa30■■■□□ 2.39
SMARCD2-210ENST00000584400 PRDM6Q9NQX0 595 aa30■■■□□ 2.39
SMARCD2-210ENST00000584400 SRPRBQ9Y5M8 271 aaKnown RBP30■■■□□ 2.39
SMARCD2-210ENST00000584400 NCK2O43639 380 aa29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 HIP1RO75146 1068 aa29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 OFD1O75665 1012 aa29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 FGF18O76093 207 aa29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 TXLNAP40222 546 aa29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 CEBPZQ03701 1054 aaKnown RBP29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 KRT17Q04695 432 aa29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 RNASELQ05823 741 aaKnown RBP29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 PRPF4BQ13523 1007 aaKnown RBP29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 LONRF3Q496Y0 759 aa29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 POF1BQ8WVV4 589 aa29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 CCSER1Q9C0I3 900 aa29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 CCDC39Q9UFE4 941 aa29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 INPP5FQ9Y2H2 1132 aa29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 IPPQ9Y573 584 aa29.99■■■□□ 2.39
SMARCD2-210ENST00000584400 NLRC5Q86WI3 1866 aa29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 CCDC169A6NNP5 214 aa29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 ACKR2O00590 384 aa29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 N4BP3O15049 544 aa29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 B4GALT5O43286 388 aa29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 PRKCBP05771 671 aa29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 MARCKSP29966 332 aaPredicted RBP29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 PLCB3Q01970 1234 aa29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 AGMOQ6ZNB7 445 aa29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 SYMPKQ92797 1274 aaKnown RBP29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 SPG21Q9NZD8 308 aa29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 HCSTQ9UBK5 93 aa29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 LZTS1Q9Y250 596 aa29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 RBM19Q9Y4C8 960 aaKnown RBP29.98■■■□□ 2.39
SMARCD2-210ENST00000584400 SLC12A3P55017 1021 aa29.97■■■□□ 2.39
SMARCD2-210ENST00000584400 PEX3P56589 373 aa29.97■■■□□ 2.39
SMARCD2-210ENST00000584400 SLC39A14Q15043 492 aa29.97■■■□□ 2.39
SMARCD2-210ENST00000584400 TJAP1Q5JTD0 557 aa29.97■■■□□ 2.39
SMARCD2-210ENST00000584400 PDE12Q6L8Q7 609 aaKnown RBP29.97■■■□□ 2.39
SMARCD2-210ENST00000584400 APBB1IPQ7Z5R6 666 aaPredicted RBP29.97■■■□□ 2.39
SMARCD2-210ENST00000584400 SMG8Q8ND04 991 aaKnown RBP29.97■■■□□ 2.39
SMARCD2-210ENST00000584400 USP28Q96RU2 1077 aa29.97■■■□□ 2.39
SMARCD2-210ENST00000584400 ADPGKQ9BRR6 497 aa29.97■■■□□ 2.39
SMARCD2-210ENST00000584400 EIF2AQ9BY44 585 aaKnown RBP29.97■■■□□ 2.39
SMARCD2-210ENST00000584400 TBC1D13Q9NVG8 400 aa29.97■■■□□ 2.39
SMARCD2-210ENST00000584400 FBXO2Q9UK22 296 aaPredicted RBP29.97■■■□□ 2.39
SMARCD2-210ENST00000584400 K7ERI5 159 aa29.96■■■□□ 2.39
SMARCD2-210ENST00000584400 GRIN1Q05586 938 aa29.96■■■□□ 2.39
SMARCD2-210ENST00000584400 TCEAL5Q5H9L2 206 aa29.96■■■□□ 2.39
SMARCD2-210ENST00000584400 FAM193BQ96PV7 902 aaPredicted RBP29.96■■■□□ 2.39
SMARCD2-210ENST00000584400 ASB2Q96Q27 587 aa29.96■■■□□ 2.39
SMARCD2-210ENST00000584400 CCDC113Q9H0I3 377 aa29.96■■■□□ 2.39
SMARCD2-210ENST00000584400 POLD4Q9HCU8 107 aa29.96■■■□□ 2.39
SMARCD2-210ENST00000584400 KMT5AQ9NQR1 393 aa29.96■■■□□ 2.39
SMARCD2-210ENST00000584400 GIT1Q9Y2X7 761 aa29.96■■■□□ 2.39
SMARCD2-210ENST00000584400 FNDC1Q4ZHG4 1894 aaPredicted RBP29.95■■■□□ 2.39
SMARCD2-210ENST00000584400 MEIS3P2A8K0S8 358 aa29.95■■■□□ 2.39
SMARCD2-210ENST00000584400 ZSCAN22P10073 491 aaPredicted RBP29.95■■■□□ 2.39
SMARCD2-210ENST00000584400 LIG1P18858 919 aa29.95■■■□□ 2.39
SMARCD2-210ENST00000584400 NPTX2P47972 431 aa29.95■■■□□ 2.39
SMARCD2-210ENST00000584400 SMTNP53814 917 aa29.95■■■□□ 2.39
SMARCD2-210ENST00000584400 MICAL1Q8TDZ2 1067 aa29.95■■■□□ 2.39
SMARCD2-210ENST00000584400 MRPS27Q92552 414 aaKnown RBP29.95■■■□□ 2.39
SMARCD2-210ENST00000584400 TMEM134Q9H6X4 195 aa29.95■■■□□ 2.39
SMARCD2-210ENST00000584400 TLR9Q9NR96 1032 aa29.95■■■□□ 2.39
SMARCD2-210ENST00000584400 ZC3H11AO75152 810 aaKnown RBP eCLIP29.94■■■□□ 2.38
SMARCD2-210ENST00000584400 NPTXRO95502 500 aa29.94■■■□□ 2.38
SMARCD2-210ENST00000584400 NASPP49321 788 aaPredicted RBP29.94■■■□□ 2.38
SMARCD2-210ENST00000584400 BCAR1P56945 870 aa29.94■■■□□ 2.38
SMARCD2-210ENST00000584400 CAMK1Q14012 370 aa29.94■■■□□ 2.38
SMARCD2-210ENST00000584400 KARSQ15046 597 aaKnown RBP29.94■■■□□ 2.38
SMARCD2-210ENST00000584400 STK38Q15208 465 aa29.94■■■□□ 2.38
SMARCD2-210ENST00000584400 KRI1Q8N9T8 703 aaKnown RBP29.94■■■□□ 2.38
SMARCD2-210ENST00000584400 KIFC3Q9BVG8 833 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms