RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 FAM90A27PA6NNH2 459 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 KPNA5O15131 536 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 CYBBP04839 570 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 DBHP09172 617 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 PPM1AP35813 382 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 MAPKAPK2P49137 400 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 AGFG1P52594 562 aaKnown RBP5.89□□□□□ -1.47
SS18-223ENST00000583595 NCKAP1LP55160 1127 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 LGALS4P56470 323 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 CORO7P57737 925 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 MRPS9P82933 396 aaKnown RBP5.89□□□□□ -1.47
SS18-223ENST00000583595 PDCD2Q16342 344 aaPredicted RBP5.89□□□□□ -1.47
SS18-223ENST00000583595 MUM1Q2TAK8 710 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 PLEKHN1Q494U1 663 aaPredicted RBP5.89□□□□□ -1.47
SS18-223ENST00000583595 ANO6Q4KMQ2 910 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 FAM209BQ5JX69 171 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 PAQR3Q6TCH7 311 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 TTLL10Q6ZVT0 673 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 IGDCC3Q8IVU1 814 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 TMEM151BQ8IW70 566 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 OR2C3Q8N628 320 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 MYCT1Q8N699 235 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 NLGN2Q8NFZ4 835 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 PLEKHO2Q8TD55 490 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.89□□□□□ -1.47
SS18-223ENST00000583595 ERCC4Q92889 916 aaPredicted RBP5.89□□□□□ -1.47
SS18-223ENST00000583595 NT5C1BQ96P26 610 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 POFUT1Q9H488 388 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 EPB41L4AQ9HCS5 686 aaPredicted RBP5.89□□□□□ -1.47
SS18-223ENST00000583595 ARFGAP3Q9NP61 516 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 SLC6A20Q9NP91 592 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 GPRC5BQ9NZH0 403 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 DPP7Q9UHL4 492 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 TMPRSS11EQ9UL52 423 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 TELO2Q9Y4R8 837 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 PCDHA5Q9Y5H7 936 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 X6R8D5 127 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 KAT6BQ8WYB5 2073 aa5.89□□□□□ -1.47
SS18-223ENST00000583595 CAPN8A6NHC0 703 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 SLC27A2O14975 620 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 SRGAP3O43295 1099 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 HTRA2O43464 458 aaPredicted RBP5.88□□□□□ -1.47
SS18-223ENST00000583595 BUB1BO60566 1050 aaPredicted RBP5.88□□□□□ -1.47
SS18-223ENST00000583595 DGKIO75912 1065 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 APOL3O95236 402 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 INHBBP09529 407 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 BMP7P18075 431 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 TNFAIP3P21580 790 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 TNFSF4P23510 183 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 MAPK9P45984 424 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 BTKQ06187 659 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 TRIM25Q14258 630 aaKnown RBP5.88□□□□□ -1.47
SS18-223ENST00000583595 EPHA7Q15375 998 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 C3orf36Q3SXR2 165 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 ZBTB41Q5SVQ8 909 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 ZC3H14Q6PJT7 736 aaKnown RBP5.88□□□□□ -1.47
SS18-223ENST00000583595 ESPNLQ6ZVH7 1005 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 DPP9Q86TI2 863 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 TMEFF1Q8IYR6 380 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 NLGN4XQ8N0W4 816 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 KRT78Q8N1N4 520 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 SPATA5Q8NB90 893 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 TSPEARQ8WU66 669 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 NRG4Q8WWG1 115 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 AUTS2Q8WXX7 1259 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 LRTOMTQ8WZ04 291 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 PHKBQ93100 1093 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 DACT3Q96B18 629 aaPredicted RBP5.88□□□□□ -1.47
SS18-223ENST00000583595 EPB41L1Q9H4G0 881 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 IFT122Q9HBG6 1241 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 DMRT3Q9NQL9 472 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 CORO2BQ9UQ03 480 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 HCFC2Q9Y5Z7 792 aa5.88□□□□□ -1.47
SS18-223ENST00000583595 A0A0U1RQG5 324 aaPredicted RBP5.87□□□□□ -1.47
SS18-223ENST00000583595 DYTNA2CJ06 578 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 RHPN2P1A8MT19 583 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 F8W031 263 aaPredicted RBP5.87□□□□□ -1.47
SS18-223ENST00000583595 TLR5O60602 858 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 C4BPAP04003 597 aaKnown RBP5.87□□□□□ -1.47
SS18-223ENST00000583595 MTHFD2P13995 350 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 CCT5P48643 541 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 AFF3P51826 1226 aaKnown RBP5.87□□□□□ -1.47
SS18-223ENST00000583595 SLC5A3P53794 718 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 CACNB3P54284 484 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 ZNF200P98182 395 aaPredicted RBP5.87□□□□□ -1.47
SS18-223ENST00000583595 IL10RAQ13651 578 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 PUM3Q15397 648 aaKnown RBP5.87□□□□□ -1.47
SS18-223ENST00000583595 FIGNQ5HY92 759 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 MBNL2Q5VZF2 373 aaKnown RBP5.87□□□□□ -1.47
SS18-223ENST00000583595 BTBD8Q5XKL5 378 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 GGT6Q6P531 493 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 CNKSR3Q6P9H4 555 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 UNQ6494/PRO21346Q6UXR6 183 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 LYSMD2Q8IV50 215 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.87□□□□□ -1.47
SS18-223ENST00000583595 DPF2Q92785 391 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 RAX2Q96IS3 184 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 MYL10Q9BUA6 226 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 KCTD10Q9H3F6 313 aa5.87□□□□□ -1.47
SS18-223ENST00000583595 CERS4Q9HA82 394 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms