RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 INTS2Q9H0H0 1204 aaKnown RBP24.64■■□□□ 1.54
CCDC47-204ENST00000582252 PCIF1Q9H4Z3 704 aa24.64■■□□□ 1.54
CCDC47-204ENST00000582252 DUSP10Q9Y6W6 482 aa24.64■■□□□ 1.54
CCDC47-204ENST00000582252 IVNS1ABPQ9Y6Y0 642 aa24.64■■□□□ 1.54
CCDC47-204ENST00000582252 ZNF236Q9UL36 1845 aa24.64■■□□□ 1.54
CCDC47-204ENST00000582252 DENND3A2RUS2 1198 aa24.64■■□□□ 1.53
CCDC47-204ENST00000582252 TRIM49P0CI25 452 aa24.64■■□□□ 1.53
CCDC47-204ENST00000582252 TRIM49CP0CI26 452 aa24.64■■□□□ 1.53
CCDC47-204ENST00000582252 MAPK4P31152 587 aa24.64■■□□□ 1.53
CCDC47-204ENST00000582252 IQCEQ6IPM2 695 aa24.64■■□□□ 1.53
CCDC47-204ENST00000582252 RDH13Q8NBN7 331 aa24.64■■□□□ 1.53
CCDC47-204ENST00000582252 CBWD1Q9BRT8 395 aa24.64■■□□□ 1.53
CCDC47-204ENST00000582252 PDLIM7Q9NR12 457 aa24.64■■□□□ 1.53
CCDC47-204ENST00000582252 CPA4Q9UI42 421 aa24.64■■□□□ 1.53
CCDC47-204ENST00000582252 MAFBQ9Y5Q3 323 aaPredicted RBP24.64■■□□□ 1.53
CCDC47-204ENST00000582252 LOC102724159A0A0B4J2E5 919 aa24.63■■□□□ 1.53
CCDC47-204ENST00000582252 ENC1O14682 589 aa24.63■■□□□ 1.53
CCDC47-204ENST00000582252 ALDH1A1P00352 501 aa24.63■■□□□ 1.53
CCDC47-204ENST00000582252 PWP2Q15269 919 aaKnown RBP24.63■■□□□ 1.53
CCDC47-204ENST00000582252 CBWD6Q4V339 395 aa24.63■■□□□ 1.53
CCDC47-204ENST00000582252 CBWD3Q5JTY5 395 aa24.63■■□□□ 1.53
CCDC47-204ENST00000582252 CBWD5Q5RIA9 395 aa24.63■■□□□ 1.53
CCDC47-204ENST00000582252 USP37Q86T82 979 aa24.63■■□□□ 1.53
CCDC47-204ENST00000582252 GPIHBP1Q8IV16 184 aa24.63■■□□□ 1.53
CCDC47-204ENST00000582252 ZIC5Q96T25 663 aa24.63■■□□□ 1.53
CCDC47-204ENST00000582252 APEX2Q9UBZ4 518 aa24.63■■□□□ 1.53
CCDC47-204ENST00000582252 TSKSQ9UJT2 592 aa24.63■■□□□ 1.53
CCDC47-204ENST00000582252 OATP04181 439 aa24.62■■□□□ 1.53
CCDC47-204ENST00000582252 FAM160B1Q5W0V3 765 aa24.62■■□□□ 1.53
CCDC47-204ENST00000582252 KCNV1Q6PIU1 500 aa24.62■■□□□ 1.53
CCDC47-204ENST00000582252 ADAMTS1Q9UHI8 967 aa24.62■■□□□ 1.53
CCDC47-204ENST00000582252 SYNGAP1Q96PV0 1343 aa24.62■■□□□ 1.53
CCDC47-204ENST00000582252 A0A087X0T9 212 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 SOWAHBA6NEL2 793 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 BTNL10A8MVZ5 291 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 PMM2O15305 246 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 MOCS3O95396 460 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 PGK2P07205 417 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 FAM228BP0C875 321 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 PRLRP16471 622 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 SOX5P35711 763 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 POLGP54098 1239 aaPredicted RBP24.61■■□□□ 1.53
CCDC47-204ENST00000582252 SP2Q02086 613 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 PTK2Q05397 1052 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 ENOX2Q16206 610 aaKnown RBP24.61■■□□□ 1.53
CCDC47-204ENST00000582252 MTERF2Q49AM1 385 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 C17orf99Q6UX52 265 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 MLXIPQ9HAP2 919 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 DNAJC12Q9UKB3 198 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 EMSYQ7Z589 1322 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 CA12O43570 354 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 TUBBP07437 444 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 NAP1L1P55209 391 aaKnown RBP24.61■■□□□ 1.53
CCDC47-204ENST00000582252 ENPEPQ07075 957 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 IFI16Q16666 785 aaKnown RBP24.61■■□□□ 1.53
CCDC47-204ENST00000582252 POLR3FQ9H1D9 316 aaPredicted RBP24.61■■□□□ 1.53
CCDC47-204ENST00000582252 PPME1Q9Y570 386 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 CAPN6Q9Y6Q1 641 aa24.61■■□□□ 1.53
CCDC47-204ENST00000582252 MGAMO43451 1857 aa24.6■■□□□ 1.53
CCDC47-204ENST00000582252 UBA1P22314 1058 aaKnown RBP24.6■■□□□ 1.53
CCDC47-204ENST00000582252 MCCD1P59942 119 aaPredicted RBP24.6■■□□□ 1.53
CCDC47-204ENST00000582252 CRHR2Q13324 411 aa24.6■■□□□ 1.53
CCDC47-204ENST00000582252 BMS1Q14692 1282 aaKnown RBP24.6■■□□□ 1.53
CCDC47-204ENST00000582252 NAB2Q15742 525 aa24.6■■□□□ 1.53
CCDC47-204ENST00000582252 TMCO3Q6UWJ1 677 aa24.6■■□□□ 1.53
CCDC47-204ENST00000582252 ZNF571Q7Z3V5 609 aaPredicted RBP24.6■■□□□ 1.53
CCDC47-204ENST00000582252 GPR142Q7Z601 462 aa24.6■■□□□ 1.53
CCDC47-204ENST00000582252 NRBP2Q9NSY0 501 aa24.6■■□□□ 1.53
CCDC47-204ENST00000582252 IGKV6D-21A0A0A0MT36 114 aa24.59■■□□□ 1.53
CCDC47-204ENST00000582252 F8VZ95 297 aa24.59■■□□□ 1.53
CCDC47-204ENST00000582252 TCP1P17987 556 aaKnown RBP24.59■■□□□ 1.53
CCDC47-204ENST00000582252 ADORA2AP29274 412 aa24.59■■□□□ 1.53
CCDC47-204ENST00000582252 CNGA1P29973 690 aa24.59■■□□□ 1.53
CCDC47-204ENST00000582252 EMC2Q15006 297 aa24.59■■□□□ 1.53
CCDC47-204ENST00000582252 KIAA0753Q2KHM9 967 aa24.59■■□□□ 1.53
CCDC47-204ENST00000582252 BRDTQ58F21 947 aaPredicted RBP24.59■■□□□ 1.53
CCDC47-204ENST00000582252 PLEKHH3Q7Z736 793 aa24.59■■□□□ 1.53
CCDC47-204ENST00000582252 BSNDQ8WZ55 320 aa24.59■■□□□ 1.53
CCDC47-204ENST00000582252 NIFKQ9BYG3 293 aaKnown RBP24.59■■□□□ 1.53
CCDC47-204ENST00000582252 XPNPEP1Q9NQW7 623 aa24.59■■□□□ 1.53
CCDC47-204ENST00000582252 SNX12Q9UMY4 172 aa24.59■■□□□ 1.53
CCDC47-204ENST00000582252 TISP43B9A030 160 aa24.58■■□□□ 1.53
CCDC47-204ENST00000582252 SORBS3O60504 671 aa24.58■■□□□ 1.53
CCDC47-204ENST00000582252 FARP2O94887 1054 aaPredicted RBP24.58■■□□□ 1.53
CCDC47-204ENST00000582252 GARTP22102 1010 aa24.58■■□□□ 1.53
CCDC47-204ENST00000582252 RFC5P40937 340 aa24.58■■□□□ 1.53
CCDC47-204ENST00000582252 CLCN6P51797 869 aa24.58■■□□□ 1.53
CCDC47-204ENST00000582252 GRB14Q14449 540 aa24.58■■□□□ 1.53
CCDC47-204ENST00000582252 DRAP1Q14919 205 aaPredicted RBP24.58■■□□□ 1.53
CCDC47-204ENST00000582252 CAGE1Q8TC20 777 aa24.58■■□□□ 1.53
CCDC47-204ENST00000582252 KCNN1Q92952 543 aa24.58■■□□□ 1.53
CCDC47-204ENST00000582252 FGD4Q96M96 766 aa24.58■■□□□ 1.53
CCDC47-204ENST00000582252 HDAC6Q9UBN7 1215 aa24.58■■□□□ 1.53
CCDC47-204ENST00000582252 HYOU1Q9Y4L1 999 aa24.58■■□□□ 1.53
CCDC47-204ENST00000582252 AOC2O75106 756 aa24.58■■□□□ 1.52
CCDC47-204ENST00000582252 MXI1P50539 228 aa24.58■■□□□ 1.52
CCDC47-204ENST00000582252 SNRNP35Q16560 246 aaKnown RBP24.58■■□□□ 1.52
CCDC47-204ENST00000582252 METTL7BQ6UX53 244 aa24.58■■□□□ 1.52
CCDC47-204ENST00000582252 SLC7A3Q8WY07 619 aa24.58■■□□□ 1.52
CCDC47-204ENST00000582252 FAM167AQ96KS9 214 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms