RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 MBTD1Q05BQ5 628 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 PPIGQ13427 754 aaKnown RBP eCLIP12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 KYAT1Q16773 422 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 BMT2Q1RMZ1 405 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 FBXO47Q5MNV8 452 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 SLFN12LQ6IEE8 588 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 NOTUMQ6P988 496 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 ZPBP2Q6X784 338 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 MAP4K3Q8IVH8 894 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 HACE1Q8IYU2 909 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 C7orf61Q8IZ16 206 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 SEPT8Q92599 483 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 DHTKD1Q96HY7 919 aaPredicted RBP12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 PPP1R16BQ96T49 567 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 LBHD1Q9BQE6 289 aaPredicted RBP12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 PPP1R12CQ9BZL4 782 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 FZD8Q9H461 694 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 GRPEL1Q9HAV7 217 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 MYH11P35749 1972 aa12.9□□□□□ -0.34
SNORD3C-201ENST00000580533 CNTNAP2Q9UHC6 1331 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 BIN1O00499 593 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 N4BP3O15049 544 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 EFCAB14O75071 495 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 SKIP12755 728 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 ACTN1P12814 892 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 ZNF445P59923 1031 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 STK4Q13043 487 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 KNOP1Q1ED39 458 aaKnown RBP12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 MFSD5Q6N075 450 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 EPM2AIP1Q7L775 607 aaPredicted RBP12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 ZNF507Q8TCN5 953 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 ERCC4Q92889 916 aaPredicted RBP12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 WNT8BQ93098 351 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 KIFC3Q9BVG8 833 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 IFIH1Q9BYX4 1025 aaKnown RBP12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 CCDC113Q9H0I3 377 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 GBP3Q9H0R5 595 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 POLD4Q9HCU8 107 aa12.89□□□□□ -0.35
SNORD3C-201ENST00000580533 EVPLQ92817 2033 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 TOM1L1O75674 476 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 PPP1R37O75864 691 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 FGFR1OPO95684 399 aaKnown RBP12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 PIGRP01833 764 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 MYBP10242 640 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 GHRP10912 638 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 RPL13P26373 211 aaKnown RBP12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 MATR3P43243 847 aaKnown RBP eCLIP12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 RAB27AP51159 221 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 LRRC63Q05C16 580 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 NFX1Q12986 1120 aaKnown RBP12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 LPIN1Q14693 890 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 ZSCAN23Q3MJ62 389 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 DCAF4L1Q3SXM0 396 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 ATF7IP2Q5U623 682 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 FOXR2Q6PJQ5 311 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 KIAA0895Q8NCT3 520 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 FIZ1Q96SL8 496 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 TCHPQ9BT92 498 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 STRA6Q9BX79 667 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 TRIM6Q9C030 488 aaPredicted RBP12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 MTIF3Q9H2K0 278 aaKnown RBP12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 AGPAT5Q9NUQ2 364 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 TYW1Q9NV66 732 aaKnown RBP12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 PIN4Q9Y237 131 aaKnown RBP12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 ADGRA3Q8IWK6 1321 aa12.88□□□□□ -0.35
SNORD3C-201ENST00000580533 TRIP12Q14669 1992 aaPredicted RBP12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 SYCE3A1L190 88 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 PDXKO00764 312 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 CLDN3O15551 220 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 TSPAN1O60635 241 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 PRPF6O94906 941 aaKnown RBP12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 LDHAP00338 332 aaKnown RBP12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 CXCL10P02778 98 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 ERCC5P28715 1186 aaPredicted RBP12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 CYP2C18P33260 490 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 CCL23P55773 120 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 FPGSQ05932 587 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 TYRO3Q06418 890 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 PAK1Q13153 545 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 MYBPC2Q14324 1141 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 ZC2HC1CQ53FD0 456 aaPredicted RBP12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 SLC27A1Q6PCB7 646 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 SCFD1Q8WVM8 642 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 ZNF668Q96K58 619 aaPredicted RBP12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 C1orf112Q9NSG2 853 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 PADI3Q9ULW8 664 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 ST3GAL5Q9UNP4 418 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 TNFSF13BQ9Y275 285 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 GDAQ9Y2T3 454 aa12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 NOC2LQ9Y3T9 749 aaKnown RBP12.87□□□□□ -0.35
SNORD3C-201ENST00000580533 TRIM43BA6NCK2 446 aa12.86□□□□□ -0.35
SNORD3C-201ENST00000580533 BAIAP3O94812 1187 aa12.86□□□□□ -0.35
SNORD3C-201ENST00000580533 GARTP22102 1010 aa12.86□□□□□ -0.35
SNORD3C-201ENST00000580533 CD52P31358 61 aa12.86□□□□□ -0.35
SNORD3C-201ENST00000580533 PRCPP42785 496 aa12.86□□□□□ -0.35
SNORD3C-201ENST00000580533 IKBKEQ14164 716 aa12.86□□□□□ -0.35
SNORD3C-201ENST00000580533 NOLC1Q14978 699 aaKnown RBP eCLIP12.86□□□□□ -0.352e-40■□□□□ 11
SNORD3C-201ENST00000580533 TPD52L1Q16890 204 aaPredicted RBP12.86□□□□□ -0.35
SNORD3C-201ENST00000580533 EDRF1Q3B7T1 1238 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms