RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 VAMP7P51809 220 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CDK17Q00537 523 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 STRN3Q13033 797 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 KLHDC7AQ5VTJ3 777 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 IER5Q5VY09 327 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 TRIM65Q6PJ69 517 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 MSL3Q8N5Y2 521 aaKnown RBP16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 LZTFL1Q9NQ48 299 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 KCNG1Q9UIX4 513 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GOLGA6L9A6NEM1 432 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 KIF2AO00139 706 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GAS2O43903 313 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 MMP3P08254 477 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 HOXC6P09630 235 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CTGFP29279 349 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ABCD1P33897 745 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CLCN3P51790 818 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 IGBP1P78318 339 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PPP3CAQ08209 521 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 RAPGEF1Q13905 1077 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CYP4F22Q6NT55 531 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GJB7Q6PEY0 223 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SYT10Q6XYQ8 523 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PSPC1Q8WXF1 523 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 LENG1Q96BZ8 264 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 C16orf70Q9BSU1 422 aa16.16■□□□□ 0.18
CDK5RAP3-218ENST00000580391 K7ERI5 159 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 TNPO2O14787 897 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ADCY3O60266 1144 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 C22orf31O95567 290 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GJB1P08034 283 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 INSRRP14616 1297 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GARTP22102 1010 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CYP2C19P33261 490 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CYLC1P35663 651 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 LAMTOR4Q0VGL1 99 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 HGSNATQ68CP4 663 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 TCP11Q8WWU5 503 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 FBXL18Q96ME1 805 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CENPFP49454 3210 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 FANCGO15287 622 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PIGRP01833 764 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 TM4SF4P48230 202 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GCLMP48507 274 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ETF1P62495 437 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 TNFAIP2Q03169 654 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SFMBT2Q5VUG0 894 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 IQSEC1Q6DN90 963 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CCDC170Q8IYT3 715 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GPD1LQ8N335 351 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ZNF668Q96K58 619 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 APBA2Q99767 749 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 TARS2Q9BW92 718 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 HAPLN2Q9GZV7 340 aa16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 INTS2Q9H0H0 1204 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ABL1P00519 1130 aa16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 HOXD8P13378 290 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 EIF4A3P38919 411 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 RGS2P41220 211 aa16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TDRD12Q587J7 1177 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 CDCA2Q69YH5 1023 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 IQCEQ6IPM2 695 aa16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 EFCAB12Q6NXP0 572 aa16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 EXOC8Q8IYI6 725 aa16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 RNF149Q8NC42 400 aa16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ZBTB45Q96K62 511 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 IRX2Q9BZI1 471 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 CCDC113Q9H0I3 377 aa16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TMEM134Q9H6X4 195 aa16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 SUCLA2Q9P2R7 463 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 GJD2Q9UKL4 321 aa16.14■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TTLL13PA6NNM8 815 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 LRRIQ3A6PVS8 624 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 EIF3CLB5ME19 914 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ZNF263O14978 683 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 CA12O43570 354 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ZNF865P0CJ78 1059 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 SRGAP2CP0DJJ0 459 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ANK1P16157 1881 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 SCP2P22307 547 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 KIF11P52732 1056 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MXD4Q14582 209 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ZNF484Q5JVG2 852 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 OLFML2BQ68BL8 750 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 RHPN2Q8IUC4 686 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 METTL13Q8N6R0 699 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 SOCS4Q8WXH5 440 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 SYN2Q92777 582 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 CCDC127Q96BQ5 260 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 HHIPL1Q96JK4 782 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 CCDC42Q96M95 316 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 EIF3CQ99613 913 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 JPH2Q9BR39 696 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 FAM213AQ9BRX8 229 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 NUCKS1Q9H1E3 243 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TOPORSQ9NS56 1045 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ANKFY1Q9P2R3 1169 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 DNAI1Q9UI46 699 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ZNF215Q9UL58 517 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TFR2Q9UP52 801 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms