RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 NOTUMQ6P988 496 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 ELMSAN1Q6PJG2 1045 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 SUSD6Q92537 303 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 LPPQ93052 612 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 IGSF21Q96ID5 467 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 EMILIN2Q9BXX0 1053 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 TRIM6Q9C030 488 aaPredicted RBP15.27■□□□□ 0.04
GGA3-208ENST00000579743 BMP2KQ9NSY1 1161 aaPredicted RBP15.27■□□□□ 0.04
GGA3-208ENST00000579743 SSX2IPQ9Y2D8 614 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 BTBD18B2RXH4 712 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 INO80B-WBP1J3KQ70 363 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 GALTP07902 379 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 ITGA4P13612 1032 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 FDPSP14324 419 aaKnown RBP15.26■□□□□ 0.03
GGA3-208ENST00000579743 MTHFRP42898 656 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 MRPL10Q7Z7H8 261 aaKnown RBP15.26■□□□□ 0.03
GGA3-208ENST00000579743 SUGP1Q8IWZ8 645 aaKnown RBP15.26■□□□□ 0.03
GGA3-208ENST00000579743 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
GGA3-208ENST00000579743 NSUN7Q8NE18 718 aaKnown RBP15.26■□□□□ 0.03
GGA3-208ENST00000579743 VN1R2Q8NFZ6 395 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 ERMNQ8TAM6 284 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 TMEM175Q9BSA9 504 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 NRDE2Q9H7Z3 1164 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 WRAP73Q9P2S5 460 aaPredicted RBP15.26■□□□□ 0.03
GGA3-208ENST00000579743 DPP7Q9UHL4 492 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 LIMCH1Q9UPQ0 1083 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 FAN1Q9Y2M0 1017 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 HCFC2Q9Y5Z7 792 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 IRAK3Q9Y616 596 aa15.26■□□□□ 0.03
GGA3-208ENST00000579743 CLASP2O75122 1294 aaKnown RBP15.25■□□□□ 0.03
GGA3-208ENST00000579743 CTSAP10619 480 aa15.25■□□□□ 0.03
GGA3-208ENST00000579743 NCLP19338 710 aaKnown RBP15.25■□□□□ 0.03
GGA3-208ENST00000579743 RBM10P98175 930 aaKnown RBP15.25■□□□□ 0.03
GGA3-208ENST00000579743 SPIRE1Q08AE8 756 aa15.25■□□□□ 0.03
GGA3-208ENST00000579743 ORC2Q13416 577 aaPredicted RBP15.25■□□□□ 0.03
GGA3-208ENST00000579743 KCNC3Q14003 757 aa15.25■□□□□ 0.03
GGA3-208ENST00000579743 EARS2Q5JPH6 523 aaKnown RBP15.25■□□□□ 0.03
GGA3-208ENST00000579743 ATAT1Q5SQI0 421 aa15.25■□□□□ 0.03
GGA3-208ENST00000579743 TRIM67Q6ZTA4 783 aa15.25■□□□□ 0.03
GGA3-208ENST00000579743 TNFRSF25Q93038 417 aa15.25■□□□□ 0.03
GGA3-208ENST00000579743 PRRX2Q99811 253 aa15.25■□□□□ 0.03
GGA3-208ENST00000579743 HSD17B14Q9BPX1 270 aa15.25■□□□□ 0.03
GGA3-208ENST00000579743 ZBP1Q9H171 429 aa15.25■□□□□ 0.03
GGA3-208ENST00000579743 S1PR5Q9H228 398 aa15.25■□□□□ 0.03
GGA3-208ENST00000579743 ADAM7Q9H2U9 754 aa15.25■□□□□ 0.03
GGA3-208ENST00000579743 FOSBP53539 338 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 PTENP60484 403 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 ZXDAP98168 799 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 SYCE2Q6PIF2 218 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 AGMOQ6ZNB7 445 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 BMP8AQ7Z5Y6 402 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 CABP7Q86V35 215 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 FAM184AQ8NB25 1140 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 MCPH1Q8NEM0 835 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 PBXIP1Q96AQ6 731 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 C8orf76Q96K31 380 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 ZSCAN31Q96LW9 406 aaPredicted RBP15.24■□□□□ 0.03
GGA3-208ENST00000579743 LLPHQ9BRT6 129 aaKnown RBP15.24■□□□□ 0.03
GGA3-208ENST00000579743 APOL5Q9BWW9 433 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 TSHZ2Q9NRE2 1034 aa15.24■□□□□ 0.03
GGA3-208ENST00000579743 MRPL17Q9NRX2 175 aaKnown RBP15.24■□□□□ 0.03
GGA3-208ENST00000579743 DAXXQ9UER7 740 aaPredicted RBP15.24■□□□□ 0.03
GGA3-208ENST00000579743 FAM205CA6NFA0 338 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 TMEM221A6NGB7 291 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 M0R296 226 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 ATP2B1P20020 1258 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 KLRC2P26717 231 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 HOXA11P31270 313 aaPredicted RBP15.23■□□□□ 0.03
GGA3-208ENST00000579743 MCM7P33993 719 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 SLC11A1P49279 550 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 HMGN5P82970 282 aaKnown RBP15.23■□□□□ 0.03
GGA3-208ENST00000579743 SIGLEC14Q08ET2 396 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 HFE2Q6ZVN8 426 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 IFNLR1Q8IU57 520 aaPredicted RBP15.23■□□□□ 0.03
GGA3-208ENST00000579743 NACC1Q96RE7 527 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 NFKBIZQ9BYH8 718 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 CSRNP2Q9H175 543 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 MINDY3Q9H8M7 445 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 TUFT1Q9NNX1 390 aa15.23■□□□□ 0.03
GGA3-208ENST00000579743 NOL7Q9UMY1 257 aaKnown RBP15.23■□□□□ 0.03
GGA3-208ENST00000579743 ZBTB39O15060 712 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 TSPAN1O60635 241 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 JAK2O60674 1132 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 DTNBO60941 627 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 LARGE1O95461 756 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 POMCP01189 267 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 URODP06132 367 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
GGA3-208ENST00000579743 RBM25P49756 843 aaKnown RBP15.22■□□□□ 0.03
GGA3-208ENST00000579743 RARRES1P49788 294 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 TMEM132AQ24JP5 1023 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 KIAA1841Q6NSI8 718 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 ZNF280BQ86YH2 543 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 ZBTB8OSQ8IWT0 167 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 PLCD3Q8N3E9 789 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 MTMR9Q96QG7 549 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 COLEC11Q9BWP8 271 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 FOXP1Q9H334 677 aaPredicted RBP15.22■□□□□ 0.03
GGA3-208ENST00000579743 DNAJB4Q9UDY4 337 aa15.22■□□□□ 0.03
GGA3-208ENST00000579743 DBR1Q9UK59 544 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms