RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 HIP1RO75146 1068 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 KRT18P05783 430 aaKnown RBP19.31■□□□□ 0.68
ITGB4-205ENST00000579211 ZSCAN22P10073 491 aaPredicted RBP19.31■□□□□ 0.68
ITGB4-205ENST00000579211 ARF4P18085 180 aaPredicted RBP19.31■□□□□ 0.68
ITGB4-205ENST00000579211 HOXA11P31270 313 aaPredicted RBP19.31■□□□□ 0.68
ITGB4-205ENST00000579211 EFNA5P52803 228 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 PEX3P56589 373 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 GRIN1Q05586 938 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 DMP1Q13316 513 aaPredicted RBP19.31■□□□□ 0.68
ITGB4-205ENST00000579211 PRPF4BQ13523 1007 aaKnown RBP19.31■□□□□ 0.68
ITGB4-205ENST00000579211 KARSQ15046 597 aaKnown RBP19.31■□□□□ 0.68
ITGB4-205ENST00000579211 PTPAQ15257 358 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 FOXD4L6Q3SYB3 417 aaPredicted RBP19.31■□□□□ 0.68
ITGB4-205ENST00000579211 CLLU1OSQ5K130 101 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 FOXD4L3Q6VB84 417 aaPredicted RBP19.31■□□□□ 0.68
ITGB4-205ENST00000579211 SYT2Q8N9I0 419 aaPredicted RBP19.31■□□□□ 0.68
ITGB4-205ENST00000579211 KLHL23Q8NBE8 558 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 RSPH1Q8WYR4 309 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 BSNDQ8WZ55 320 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 PRIMPOLQ96LW4 560 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 RUSC1Q9BVN2 902 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 UBN1Q9NPG3 1134 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 KCNG1Q9UIX4 513 aa19.31■□□□□ 0.68
ITGB4-205ENST00000579211 SRPRBQ9Y5M8 271 aaKnown RBP19.31■□□□□ 0.68
ITGB4-205ENST00000579211 REV3LO60673 3130 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 K7ERI5 159 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 GRM6O15303 877 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 PRKCBP05771 671 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 ATF7P17544 494 aaPredicted RBP19.3■□□□□ 0.68
ITGB4-205ENST00000579211 SLC39A14Q15043 492 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 TMEM119Q4V9L6 283 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 TIGD5Q53EQ6 642 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 SPECC1Q5M775 1068 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 CDCA2Q69YH5 1023 aaPredicted RBP19.3■□□□□ 0.68
ITGB4-205ENST00000579211 SLC27A1Q6PCB7 646 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 C1orf186Q6ZWK4 172 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 KRI1Q8N9T8 703 aaKnown RBP19.3■□□□□ 0.68
ITGB4-205ENST00000579211 COLGALT1Q8NBJ5 622 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 ZNF558Q96NG5 402 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 FAM193BQ96PV7 902 aaPredicted RBP19.3■□□□□ 0.68
ITGB4-205ENST00000579211 APOL6Q9BWW8 343 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 CWH43Q9H720 699 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 RSAD1Q9HA92 442 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 KMT5AQ9NQR1 393 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 RNF19AQ9NV58 838 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 KCND2Q9NZV8 630 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 TFIP11Q9UBB9 837 aaKnown RBP19.3■□□□□ 0.68
ITGB4-205ENST00000579211 DAXXQ9UER7 740 aaPredicted RBP19.3■□□□□ 0.68
ITGB4-205ENST00000579211 PLAGL2Q9UPG8 496 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 CITO14578 2027 aa19.3■□□□□ 0.68
ITGB4-205ENST00000579211 TCF20Q9UGU0 1960 aaKnown RBP19.3■□□□□ 0.68
ITGB4-205ENST00000579211 CNTNAP2Q9UHC6 1331 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 B4GALT5O43286 388 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 NPTXRO95502 500 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 F13A1P00488 732 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 LINC00271P0C7V0 271 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 PLCG1P19174 1290 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 ALDH7A1P49419 539 aaKnown RBP19.29■□□□□ 0.68
ITGB4-205ENST00000579211 SMTNP53814 917 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 NOMO2Q5JPE7 1267 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 UBXN11Q5T124 520 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 LRRC55Q6ZSA7 311 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 CDR2LQ86X02 465 aaPredicted RBP19.29■□□□□ 0.68
ITGB4-205ENST00000579211 MICAL1Q8TDZ2 1067 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 EPSTI1Q96J88 318 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 CLIC6Q96NY7 704 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 ADPGKQ9BRR6 497 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 EIF2AQ9BY44 585 aaKnown RBP19.29■□□□□ 0.68
ITGB4-205ENST00000579211 CCSER1Q9C0I3 900 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 GBP3Q9H0R5 595 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 THEGQ9P2T0 379 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 HCSTQ9UBK5 93 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 PUF60Q9UHX1 559 aaKnown RBP19.29■□□□□ 0.68
ITGB4-205ENST00000579211 FBXO2Q9UK22 296 aaPredicted RBP19.29■□□□□ 0.68
ITGB4-205ENST00000579211 IPPQ9Y573 584 aa19.29■□□□□ 0.68
ITGB4-205ENST00000579211 PRUNE2Q8WUY3 3088 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 SFI1A8K8P3 1242 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 ACKR2O00590 384 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 N4BP3O15049 544 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 OFD1O75665 1012 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 ITGB1P05556 798 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 NCLP19338 710 aaKnown RBP19.28■□□□□ 0.68
ITGB4-205ENST00000579211 GUCY2CP25092 1073 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 SLC12A3P55017 1021 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 KRT17Q04695 432 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 AMHR2Q16671 573 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 KCNT2Q6UVM3 1135 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 EP400NLQ6ZTU2 488 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 APBB1IPQ7Z5R6 666 aaPredicted RBP19.28■□□□□ 0.68
ITGB4-205ENST00000579211 MRPL10Q7Z7H8 261 aaKnown RBP19.28■□□□□ 0.68
ITGB4-205ENST00000579211 GPBP1Q86WP2 473 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 POF1BQ8WVV4 589 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 SYMPKQ92797 1274 aaKnown RBP19.28■□□□□ 0.68
ITGB4-205ENST00000579211 PPP2R3CQ969Q6 453 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 KIFC3Q9BVG8 833 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 FZD8Q9H461 694 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 NSUN3Q9H649 340 aaKnown RBP19.28■□□□□ 0.68
ITGB4-205ENST00000579211 C17orf75Q9HAS0 396 aa19.28■□□□□ 0.68
ITGB4-205ENST00000579211 PRDM6Q9NQX0 595 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms