RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 TTC28Q96AY4 2481 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 C5orf67F2Z3F1 127 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 TULP1O00294 542 aaPredicted RBP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 GRM6O15303 877 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 B4GALT5O43286 388 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 SLC26A4O43511 780 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 NCK2O43639 380 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 TSPAN1O60635 241 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 ZNF623O75123 536 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 HIP1RO75146 1068 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 ZC3H11AO75152 810 aaKnown RBP eCLIP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 FGF18O76093 207 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 NPTXRO95502 500 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 POMCP01189 267 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 ALDH2P05091 517 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 ITGB1P05556 798 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 PRKCBP05771 671 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 HOXA11P31270 313 aaPredicted RBP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 PPM1AP35813 382 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 MATR3P43243 847 aaKnown RBP eCLIP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 MBTD1Q05BQ5 628 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 STRN3Q13033 797 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 RESTQ13127 1097 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 KARSQ15046 597 aaKnown RBP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 TIGD5Q53EQ6 642 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 SPECC1Q5M775 1068 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 RRAGBQ5VZM2 374 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 RINT1Q6NUQ1 792 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 SLC27A1Q6PCB7 646 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 KCNT2Q6UVM3 1135 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 TMC7Q7Z402 723 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 RBM23Q86U06 439 aaKnown RBP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 GPBP1Q86WP2 473 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 CDR2LQ86X02 465 aaPredicted RBP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 SYT2Q8N9I0 419 aaPredicted RBP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 KRI1Q8N9T8 703 aaKnown RBP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 COLGALT1Q8NBJ5 622 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 ATXN2LQ8WWM7 1075 aaKnown RBP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 RSPH1Q8WYR4 309 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 P2RX5Q93086 422 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 EPSTI1Q96J88 318 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 MMTAG2Q9BU76 263 aaKnown RBP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 RUSC1Q9BVN2 902 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 TIPINQ9BVW5 301 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 TRAIPQ9BWF2 469 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 NFKBIZQ9BYH8 718 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 LMAN2LQ9H0V9 348 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 CSRNP2Q9H175 543 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 NSUN3Q9H649 340 aaKnown RBP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 RSAD1Q9HA92 442 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 PRDM6Q9NQX0 595 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 COG5Q9UP83 839 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 RBM19Q9Y4C8 960 aaKnown RBP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 SRPRBQ9Y5M8 271 aaKnown RBP7.23□□□□□ -1.25
TRAF4-213ENST00000578917 BDP1A6H8Y1 2624 aa7.23□□□□□ -1.25
TRAF4-213ENST00000578917 A0A1B0GUA9 196 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 CARNS1A5YM72 827 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 NT5C1B-RDH14C9J2C7 533 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 DLL1O00548 723 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 ACKR2O00590 384 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 N4BP3O15049 544 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 SPTLC2O15270 562 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 SLC16A4O15374 487 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 TBCAO75347 108 aaKnown RBP7.22□□□□□ -1.25
TRAF4-213ENST00000578917 OFD1O75665 1012 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 FAM13AO94988 1023 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 ZSCAN22P10073 491 aaPredicted RBP7.22□□□□□ -1.25
TRAF4-213ENST00000578917 ARF4P18085 180 aaPredicted RBP7.22□□□□□ -1.25
TRAF4-213ENST00000578917 PLCG1P19174 1290 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 NCLP19338 710 aaKnown RBP7.22□□□□□ -1.25
TRAF4-213ENST00000578917 KCNA5P22460 613 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 AKAP5P24588 427 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 DDIT3P35638 169 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 PBX3P40426 434 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 NPTX2P47972 431 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 ME1P48163 572 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 BCAR1P56945 870 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 TFF2Q03403 129 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 SLC39A14Q15043 492 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 TCEAL5Q5H9L2 206 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 CLLU1OSQ5K130 101 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 LRRC55Q6ZSA7 311 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 C1orf186Q6ZWK4 172 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 KCNK18Q7Z418 384 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 MRPL10Q7Z7H8 261 aaKnown RBP7.22□□□□□ -1.25
TRAF4-213ENST00000578917 ZNF598Q86UK7 904 aaKnown RBP7.22□□□□□ -1.25
TRAF4-213ENST00000578917 IFNLR1Q8IU57 520 aaPredicted RBP7.22□□□□□ -1.25
TRAF4-213ENST00000578917 MYCT1Q8N699 235 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 SPPL3Q8TCT6 385 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 POF1BQ8WVV4 589 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 SYMPKQ92797 1274 aaKnown RBP7.22□□□□□ -1.25
TRAF4-213ENST00000578917 BICD1Q96G01 975 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 TMEM169Q96HH4 297 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 PRIMPOLQ96LW4 560 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 CLIC6Q96NY7 704 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 PNMA5Q96PV4 448 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 ASB2Q96Q27 587 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 USP28Q96RU2 1077 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 KIFC3Q9BVG8 833 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 EIF2AQ9BY44 585 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms