RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 FBXO18Q8NFZ0 1043 aa17.67■□□□□ 0.42
CRLF3-203ENST00000578692 DCXO43602 365 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 GALTP07902 379 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 SPATA31C1P0DKV0 1188 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 SRGAP2BP0DMP2 458 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 AXLP30530 894 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 ARL2P36404 184 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 TECP42680 631 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 NCBP1Q09161 790 aaKnown RBP17.66■□□□□ 0.42
CRLF3-203ENST00000578692 CATSPER3Q86XQ3 398 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 IFNLR1Q8IU57 520 aaPredicted RBP17.66■□□□□ 0.42
CRLF3-203ENST00000578692 CNNM3Q8NE01 707 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 URGCPQ8TCY9 931 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 TUFT1Q9NNX1 390 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 USP15Q9Y4E8 981 aaPredicted RBP17.66■□□□□ 0.42
CRLF3-203ENST00000578692 C2orf71A6NGG8 1288 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 INO80B-WBP1J3KQ70 363 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 CXCL14O95715 111 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 NCLP19338 710 aaKnown RBP17.66■□□□□ 0.42
CRLF3-203ENST00000578692 RBM25P49756 843 aaKnown RBP17.66■□□□□ 0.42
CRLF3-203ENST00000578692 ORC2Q13416 577 aaPredicted RBP17.66■□□□□ 0.42
CRLF3-203ENST00000578692 GNL2Q13823 731 aaKnown RBP17.66■□□□□ 0.42
CRLF3-203ENST00000578692 LLGL2Q6P1M3 1020 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 ZNF280BQ86YH2 543 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 VPS52Q8N1B4 723 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 ASAP3Q8TDY4 903 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 IGSF21Q96ID5 467 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 GBP3Q9H0R5 595 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 RSAD1Q9HA92 442 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 KANSL3Q9P2N6 904 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 DNAJB4Q9UDY4 337 aa17.66■□□□□ 0.42
CRLF3-203ENST00000578692 CNTNAP2Q9UHC6 1331 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 TSPAN1O60635 241 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 MED24O75448 989 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 ALDH2P05091 517 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 GLRA2P23416 452 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 CA8P35219 290 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 CAPSQ13938 189 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 ANKRD54Q6NXT1 300 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 NOTUMQ6P988 496 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 DDX53Q86TM3 631 aaKnown RBP17.65■□□□□ 0.42
CRLF3-203ENST00000578692 TMEM173Q86WV6 379 aaPredicted RBP17.65■□□□□ 0.42
CRLF3-203ENST00000578692 RNF135Q8IUD6 432 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 SMG8Q8ND04 991 aaKnown RBP17.65■□□□□ 0.42
CRLF3-203ENST00000578692 CPB2Q96IY4 423 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 FAM193BQ96PV7 902 aaPredicted RBP17.65■□□□□ 0.42
CRLF3-203ENST00000578692 NACC1Q96RE7 527 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 POLR3CQ9BUI4 534 aaPredicted RBP17.65■□□□□ 0.42
CRLF3-203ENST00000578692 UBN1Q9NPG3 1134 aa17.65■□□□□ 0.42
CRLF3-203ENST00000578692 PRR33A8MZF0 331 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 USO1O60763 962 aaKnown RBP17.64■□□□□ 0.41
CRLF3-203ENST00000578692 DDHD2O94830 711 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 OR52Z1P0C646 297 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 ITGA4P13612 1032 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 SLC11A1P49279 550 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 AFF1P51825 1210 aaKnown RBP17.64■□□□□ 0.41
CRLF3-203ENST00000578692 TTC38Q5R3I4 469 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 MAEAQ7L5Y9 396 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 NOSTRINQ8IVI9 506 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 SUSD6Q92537 303 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 PHF7Q9BWX1 381 aaPredicted RBP17.64■□□□□ 0.41
CRLF3-203ENST00000578692 EIF2AQ9BY44 585 aaKnown RBP17.64■□□□□ 0.41
CRLF3-203ENST00000578692 NFKBIZQ9BYH8 718 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 ZBP1Q9H171 429 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 CSRNP2Q9H175 543 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 POLR3FQ9H1D9 316 aaPredicted RBP17.64■□□□□ 0.41
CRLF3-203ENST00000578692 S1PR5Q9H228 398 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 DBR1Q9UK59 544 aaKnown RBP17.64■□□□□ 0.41
CRLF3-203ENST00000578692 IPPQ9Y573 584 aa17.64■□□□□ 0.41
CRLF3-203ENST00000578692 C5orf42Q9H799 3197 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 LOC730098B7Z3J9 87 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 CLASP2O75122 1294 aaKnown RBP17.63■□□□□ 0.41
CRLF3-203ENST00000578692 POMCP01189 267 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 CTSAP10619 480 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 HOXB8P17481 243 aaPredicted RBP17.63■□□□□ 0.41
CRLF3-203ENST00000578692 RPA1P27694 616 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 TRAPPC10P48553 1259 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 MBTD1Q05BQ5 628 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 GIT2Q14161 759 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 SYCE2Q6PIF2 218 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 TMEM87AQ8NBN3 555 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 ERMNQ8TAM6 284 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 CASP10Q92851 521 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 CCDC51Q96ER9 411 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 NOL7Q9UMY1 257 aaKnown RBP17.63■□□□□ 0.41
CRLF3-203ENST00000578692 FAN1Q9Y2M0 1017 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 HCFC2Q9Y5Z7 792 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 IRAK3Q9Y616 596 aa17.63■□□□□ 0.41
CRLF3-203ENST00000578692 B4GALT3O60512 393 aa17.62■□□□□ 0.41
CRLF3-203ENST00000578692 ARF4P18085 180 aaPredicted RBP17.62■□□□□ 0.41
CRLF3-203ENST00000578692 AMHR2Q16671 573 aa17.62■□□□□ 0.41
CRLF3-203ENST00000578692 HERC4Q5GLZ8 1057 aaPredicted RBP17.62■□□□□ 0.41
CRLF3-203ENST00000578692 MCPH1Q8NEM0 835 aa17.62■□□□□ 0.41
CRLF3-203ENST00000578692 BCL7CQ8WUZ0 217 aaPredicted RBP17.62■□□□□ 0.41
CRLF3-203ENST00000578692 AUTS2Q8WXX7 1259 aa17.62■□□□□ 0.41
CRLF3-203ENST00000578692 RPGRIP1Q96KN7 1286 aa17.62■□□□□ 0.41
CRLF3-203ENST00000578692 TMEM175Q9BSA9 504 aa17.62■□□□□ 0.41
CRLF3-203ENST00000578692 APOL5Q9BWW9 433 aa17.62■□□□□ 0.41
CRLF3-203ENST00000578692 RNF39Q9H2S5 420 aa17.62■□□□□ 0.41
CRLF3-203ENST00000578692 GPRC5CQ9NQ84 441 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms