RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 CWF19L1Q69YN2 538 aaKnown RBP23.5■■□□□ 1.35
TSEN54-205ENST00000578415 CCDC149Q6ZUS6 474 aa23.5■■□□□ 1.35
TSEN54-205ENST00000578415 EMILIN2Q9BXX0 1053 aa23.5■■□□□ 1.35
TSEN54-205ENST00000578415 MFSD1Q9H3U5 465 aa23.5■■□□□ 1.35
TSEN54-205ENST00000578415 DHX33Q9H6R0 707 aaKnown RBP23.5■■□□□ 1.35
TSEN54-205ENST00000578415 RSAD1Q9HA92 442 aa23.5■■□□□ 1.35
TSEN54-205ENST00000578415 DENND4AQ7Z401 1863 aa23.49■■□□□ 1.35
TSEN54-205ENST00000578415 DMDP11532 3685 aa23.49■■□□□ 1.35
TSEN54-205ENST00000578415 KLRC2P26717 231 aa23.49■■□□□ 1.35
TSEN54-205ENST00000578415 QARSP47897 775 aaKnown RBP23.49■■□□□ 1.35
TSEN54-205ENST00000578415 CLCN5P51795 746 aa23.49■■□□□ 1.35
TSEN54-205ENST00000578415 RUFY3Q7L099 469 aa23.49■■□□□ 1.35
TSEN54-205ENST00000578415 OTOP3Q7RTS5 596 aa23.49■■□□□ 1.35
TSEN54-205ENST00000578415 PRPF31Q8WWY3 499 aaKnown RBP23.49■■□□□ 1.35
TSEN54-205ENST00000578415 SLC7A3Q8WY07 619 aa23.49■■□□□ 1.35
TSEN54-205ENST00000578415 TMEM143Q96AN5 459 aa23.49■■□□□ 1.35
TSEN54-205ENST00000578415 ACSF2Q96CM8 615 aaPredicted RBP23.49■■□□□ 1.35
TSEN54-205ENST00000578415 TMEM175Q9BSA9 504 aa23.49■■□□□ 1.35
TSEN54-205ENST00000578415 KCNMB3Q9NPA1 279 aa23.49■■□□□ 1.35
TSEN54-205ENST00000578415 STK39Q9UEW8 545 aa23.49■■□□□ 1.35
TSEN54-205ENST00000578415 PTPRZ1P23471 2315 aaPredicted RBP23.48■■□□□ 1.35
TSEN54-205ENST00000578415 PRR23AA6NEV1 266 aa23.48■■□□□ 1.35
TSEN54-205ENST00000578415 LETM2Q2VYF4 491 aa23.48■■□□□ 1.35
TSEN54-205ENST00000578415 GALNT17Q6IS24 598 aa23.48■■□□□ 1.35
TSEN54-205ENST00000578415 KRT25Q7Z3Z0 450 aa23.48■■□□□ 1.35
TSEN54-205ENST00000578415 SRGAP1Q7Z6B7 1085 aa23.48■■□□□ 1.35
TSEN54-205ENST00000578415 CEP170P1Q96L14 293 aa23.48■■□□□ 1.35
TSEN54-205ENST00000578415 LARP6Q9BRS8 491 aaKnown RBP23.48■■□□□ 1.35
TSEN54-205ENST00000578415 ZSWIM6Q9HCJ5 1215 aa23.48■■□□□ 1.35
TSEN54-205ENST00000578415 FAN1Q9Y2M0 1017 aa23.48■■□□□ 1.35
TSEN54-205ENST00000578415 CNTNAP2Q9UHC6 1331 aa23.48■■□□□ 1.35
TSEN54-205ENST00000578415 SPDYE4A6NLX3 237 aa23.47■■□□□ 1.35
TSEN54-205ENST00000578415 NRP1O14786 923 aa23.47■■□□□ 1.35
TSEN54-205ENST00000578415 CPLX1O14810 134 aa23.47■■□□□ 1.35
TSEN54-205ENST00000578415 POMCP01189 267 aa23.47■■□□□ 1.35
TSEN54-205ENST00000578415 ALDH2P05091 517 aa23.47■■□□□ 1.35
TSEN54-205ENST00000578415 SRGAP2CP0DJJ0 459 aa23.47■■□□□ 1.35
TSEN54-205ENST00000578415 NPR3P17342 541 aa23.47■■□□□ 1.35
TSEN54-205ENST00000578415 LAMTOR4Q0VGL1 99 aa23.47■■□□□ 1.35
TSEN54-205ENST00000578415 C15orf39Q6ZRI6 1047 aa23.47■■□□□ 1.35
TSEN54-205ENST00000578415 FAM177A1Q8N128 213 aaPredicted RBP23.47■■□□□ 1.35
TSEN54-205ENST00000578415 PSPC1Q8WXF1 523 aaKnown RBP23.47■■□□□ 1.35
TSEN54-205ENST00000578415 ZNF274Q96GC6 653 aaPredicted RBP23.47■■□□□ 1.35
TSEN54-205ENST00000578415 MRPL17Q9NRX2 175 aaKnown RBP23.47■■□□□ 1.35
TSEN54-205ENST00000578415 BMP2KQ9NSY1 1161 aaPredicted RBP23.47■■□□□ 1.35
TSEN54-205ENST00000578415 MARCH5Q9NX47 278 aa23.47■■□□□ 1.35
TSEN54-205ENST00000578415 KANSL3Q9P2N6 904 aa23.47■■□□□ 1.35
TSEN54-205ENST00000578415 KCNJ14Q9UNX9 436 aa23.47■■□□□ 1.35
TSEN54-205ENST00000578415 REC8O95072 547 aa23.46■■□□□ 1.35
TSEN54-205ENST00000578415 P4HBP07237 508 aaKnown RBP23.46■■□□□ 1.35
TSEN54-205ENST00000578415 TDGQ13569 410 aa23.46■■□□□ 1.35
TSEN54-205ENST00000578415 SMG8Q8ND04 991 aaKnown RBP23.46■■□□□ 1.35
TSEN54-205ENST00000578415 FLCNQ8NFG4 579 aa23.46■■□□□ 1.35
TSEN54-205ENST00000578415 FAM20AQ96MK3 541 aa23.46■■□□□ 1.35
TSEN54-205ENST00000578415 KCNK12Q9HB15 430 aa23.46■■□□□ 1.35
TSEN54-205ENST00000578415 DUSP12Q9UNI6 340 aa23.46■■□□□ 1.35
TSEN54-205ENST00000578415 PPME1Q9Y570 386 aa23.46■■□□□ 1.35
TSEN54-205ENST00000578415 RIF1Q5UIP0 2472 aaKnown RBP23.45■■□□□ 1.35
TSEN54-205ENST00000578415 C2CD2LO14523 706 aa23.45■■□□□ 1.34
TSEN54-205ENST00000578415 PI15O43692 258 aa23.45■■□□□ 1.34
TSEN54-205ENST00000578415 DKC1O60832 514 aaKnown RBP eCLIP23.45■■□□□ 1.34
TSEN54-205ENST00000578415 N4BP1O75113 896 aaKnown RBP23.45■■□□□ 1.34
TSEN54-205ENST00000578415 SOD2P04179 222 aa23.45■■□□□ 1.34
TSEN54-205ENST00000578415 NCLP19338 710 aaKnown RBP23.45■■□□□ 1.34
TSEN54-205ENST00000578415 RFC5P40937 340 aa23.45■■□□□ 1.34
TSEN54-205ENST00000578415 PPP4R3AQ6IN85 833 aa23.45■■□□□ 1.34
TSEN54-205ENST00000578415 TAS1R1Q7RTX1 841 aa23.45■■□□□ 1.34
TSEN54-205ENST00000578415 CMASQ8NFW8 434 aaPredicted RBP23.45■■□□□ 1.34
TSEN54-205ENST00000578415 HAS1Q92839 578 aa23.45■■□□□ 1.34
TSEN54-205ENST00000578415 FAM193BQ96PV7 902 aaPredicted RBP23.45■■□□□ 1.34
TSEN54-205ENST00000578415 LXNQ9BS40 222 aa23.45■■□□□ 1.34
TSEN54-205ENST00000578415 HERC2P3Q9BVR0 1158 aa23.45■■□□□ 1.34
TSEN54-205ENST00000578415 MAN1C1Q9NR34 630 aa23.45■■□□□ 1.34
TSEN54-205ENST00000578415 PRG3Q9Y2Y8 225 aaPredicted RBP23.45■■□□□ 1.34
TSEN54-205ENST00000578415 EFEMP2O95967 443 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 URODP06132 367 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 AOC1P19801 751 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 STK3Q13188 491 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 FRMD5Q7Z6J6 570 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 FERMT3Q86UX7 667 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 C4orf19Q8IY42 314 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 EXOC8Q8IYI6 725 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 COLGALT2Q8IYK4 626 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 RNF168Q8IYW5 571 aaPredicted RBP23.44■■□□□ 1.34
TSEN54-205ENST00000578415 RNF149Q8NC42 400 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 RPS6KC1Q96S38 1066 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 SLKQ9H2G2 1235 aaPredicted RBP23.44■■□□□ 1.34
TSEN54-205ENST00000578415 RNF39Q9H2S5 420 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 RGL1Q9NZL6 768 aa23.44■■□□□ 1.34
TSEN54-205ENST00000578415 ZBTB39O15060 712 aa23.43■■□□□ 1.34
TSEN54-205ENST00000578415 INPPL1O15357 1258 aa23.43■■□□□ 1.34
TSEN54-205ENST00000578415 TEX28O15482 410 aa23.43■■□□□ 1.34
TSEN54-205ENST00000578415 YWHABP31946 246 aaKnown RBP23.43■■□□□ 1.34
TSEN54-205ENST00000578415 AK2P54819 239 aa23.43■■□□□ 1.34
TSEN54-205ENST00000578415 EMC2Q15006 297 aa23.43■■□□□ 1.34
TSEN54-205ENST00000578415 NEK8Q86SG6 692 aa23.43■■□□□ 1.34
TSEN54-205ENST00000578415 PHF20Q9BVI0 1012 aa23.43■■□□□ 1.34
TSEN54-205ENST00000578415 EIF2AQ9BY44 585 aaKnown RBP23.43■■□□□ 1.34
TSEN54-205ENST00000578415 IPPQ9Y573 584 aa23.43■■□□□ 1.34
TSEN54-205ENST00000578415 CYP46A1Q9Y6A2 500 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms