RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	CTSA	P10619	480 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	GLRA2	P23416	452 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	PSMA5	P28066	241 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	QARS	P47897	775 aa	Known RBP	4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	MRE11	P49959	708 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	TOB1	P50616	345 aa	Predicted RBP	4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	PTEN	P60484	403 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CYP4A11	Q02928	519 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CAPS	Q13938	189 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	EMC2	Q15006	297 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NONO	Q15233	471 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	EPHA7	Q15375	998 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	IL17A	Q16552	155 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	PTPN21	Q16825	1174 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	LETM2	Q2VYF4	491 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NOMO2	Q5JPE7	1267 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	KIAA0319	Q5VV43	1072 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CWF19L1	Q69YN2	538 aa	Known RBP	4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	MCTP2	Q6DN12	878 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	LILRA6	Q6PI73	481 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	KRT25	Q7Z3Z0	450 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NEK8	Q86SG6	692 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	DDX53	Q86TM3	631 aa	Known RBP	4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	FERMT3	Q86UX7	667 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	ZNF410	Q86VK4	478 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	VPS52	Q8N1B4	723 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	BICD2	Q8TD16	824 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CCDC12	Q8WUD4	166 aa	Predicted RBP	4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NLRP7	Q8WX94	980 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	GTF3C6	Q969F1	213 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CPB2	Q96IY4	423 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NLRP4	Q96MN2	994 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	KLHL5	Q96PQ7	755 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CDCA3	Q99618	268 aa	Predicted RBP	4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	GPR62	Q9BZJ7	368 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CCDC113	Q9H0I3	377 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	ADAM7	Q9H2U9	754 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NXF3	Q9H4D5	531 aa	Known RBP	4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CHST12	Q9NRB3	414 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CHST7	Q9NS84	486 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NRBP2	Q9NSY0	501 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	FAM86C1	Q9NVL1	165 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	ORC3	Q9UBD5	711 aa	Predicted RBP	4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	LRFN2	Q9ULH4	789 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CEP131	Q9UPN4	1083 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	PIN4	Q9Y237	131 aa	Known RBP	4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	IPP	Q9Y573	584 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	PCDHB12	Q9Y5F1	795 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	COL4A3BP	Q9Y5P4	624 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CYP46A1	Q9Y6A2	500 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	FAM186A	A6NE01	2351 aa		4.99	□□□□□ -1.61
PPP4R1-209	ENST00000578329	OTOGL	Q3ZCN5	2332 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	EP300	Q09472	2414 aa	Predicted RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	ARL5C	A6NH57	179 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	ABLIM1	O14639	778 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NRP1	O14786	923 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	TBX3	O15119	743 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	TEX28	O15482	410 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NARS	O43776	548 aa	Known RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CD2BP2	O95400	341 aa	Known RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CXCL14	O95715	111 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	POMC	P01189	267 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	P4HB	P07237	508 aa	Known RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	SRGAP2C	P0DJJ0	459 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	MYB	P10242	640 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	ARF4	P18085	180 aa	Predicted RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NCL	P19338	710 aa	Known RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	AVPR2	P30518	371 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	YWHAB	P31946	246 aa	Known RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	RARRES1	P49788	294 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	CLCN4	P51793	760 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	FOSB	P53539	338 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	FGD1	P98174	961 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	SIGLEC14	Q08ET2	396 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	NBR1	Q14596	966 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	RARS2	Q5T160	578 aa	Known RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	EEF1DP3	Q658K8	133 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	GALNT17	Q6IS24	598 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	PDE12	Q6L8Q7	609 aa	Known RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	TAS1R3	Q7RTX0	852 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	TMC7	Q7Z402	723 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	KCNK18	Q7Z418	384 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	FAM177A1	Q8N128	213 aa	Predicted RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	DAW1	Q8N136	415 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	FBXL6	Q8N531	539 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	RNF149	Q8NC42	400 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	KREMEN2	Q8NCW0	462 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	MICAL1	Q8TDZ2	1067 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	PIGO	Q8TEQ8	1089 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	RSAD2	Q8WXG1	361 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	FAM20A	Q96MK3	541 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	MAP7D2	Q96T17	732 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	GAD1	Q99259	594 aa		4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	RPP25	Q9BUL9	199 aa	Known RBP	4.98	□□□□□ -1.61
PPP4R1-209	ENST00000578329	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms