RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 TRIM67Q6ZTA4 783 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 OTUD6AQ7L8S5 288 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 DGLUCYQ7Z3D6 616 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 TLK2Q86UE8 772 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 KSR1Q8IVT5 923 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 PPTC7Q8NI37 304 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 AFAP1L1Q8TED9 768 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 PPP1R13LQ8WUF5 828 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 TRAPPC12Q8WVT3 735 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 ZBTB10Q96DT7 871 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 POP1Q99575 1024 aaKnown RBP11.1□□□□□ -0.63
CRLF3-202ENST00000577725 HSD3B7Q9H2F3 369 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 XPNPEP1Q9NQW7 623 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 CYP26B1Q9NR63 512 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 FANCLQ9NW38 375 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 GNEQ9Y223 722 aaKnown RBP11.1□□□□□ -0.63
CRLF3-202ENST00000577725 NFE2L3Q9Y4A8 694 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 DNAH14Q0VDD8 3507 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 EMSYQ7Z589 1322 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 COL4A6Q14031 1691 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 MYADML2A6NDP7 307 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 H0Y858 1186 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 IKBKBO14920 756 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 PRPF6O94906 941 aaKnown RBP11.09□□□□□ -0.63
CRLF3-202ENST00000577725 ATP1A3P13637 1013 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 GAP43P17677 238 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 ERCC5P28715 1186 aaPredicted RBP11.09□□□□□ -0.63
CRLF3-202ENST00000577725 CHMP4BP1P59074 171 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 BEX3Q00994 111 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 PSMD2Q13200 908 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 STIM1Q13586 685 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 COL9A2Q14055 689 aaPredicted RBP11.09□□□□□ -0.63
CRLF3-202ENST00000577725 EMC2Q15006 297 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 SPRED2Q7Z698 418 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 HERC6Q8IVU3 1022 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 ENOX1Q8TC92 643 aaKnown RBP11.09□□□□□ -0.63
CRLF3-202ENST00000577725 BSNDQ8WZ55 320 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 P2RX5Q93086 422 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 EMID1Q96A84 441 aaPredicted RBP11.09□□□□□ -0.63
CRLF3-202ENST00000577725 VWCEQ96DN2 955 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 NOC4LQ9BVI4 516 aaKnown RBP11.09□□□□□ -0.63
CRLF3-202ENST00000577725 POLR3FQ9H1D9 316 aaPredicted RBP11.09□□□□□ -0.63
CRLF3-202ENST00000577725 WNT8AQ9H1J5 351 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 IKZF4Q9H2S9 585 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 SMARCAD1Q9H4L7 1026 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 MRPL44Q9H9J2 332 aaKnown RBP11.09□□□□□ -0.63
CRLF3-202ENST00000577725 ATP6V0A4Q9HBG4 840 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 PARVGQ9HBI0 331 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 TLR9Q9NR96 1032 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 SAMSN1Q9NSI8 373 aaKnown RBP11.09□□□□□ -0.63
CRLF3-202ENST00000577725 NRBP2Q9NSY0 501 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 RWDD2AQ9UIY3 292 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 FAM184BQ9ULE4 1060 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 COL4A3BPQ9Y5P4 624 aa11.09□□□□□ -0.63
CRLF3-202ENST00000577725 RIOK3O14730 519 aaKnown RBP11.08□□□□□ -0.64
CRLF3-202ENST00000577725 PSMA7O14818 248 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 NKRFO15226 690 aaKnown RBP eCLIP11.08□□□□□ -0.64
CRLF3-202ENST00000577725 GCNT3O95395 438 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 ADCY5O95622 1261 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 MYL3P08590 195 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 C6orf222P0C671 652 aaPredicted RBP11.08□□□□□ -0.64
CRLF3-202ENST00000577725 ACTN1P12814 892 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 CCNE1P24864 410 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 ZNF131P52739 623 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 POLGP54098 1239 aaPredicted RBP11.08□□□□□ -0.64
CRLF3-202ENST00000577725 IGBP1P78318 339 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 TPD52L1Q16890 204 aaPredicted RBP11.08□□□□□ -0.64
CRLF3-202ENST00000577725 ZC2HC1CQ53FD0 456 aaPredicted RBP11.08□□□□□ -0.64
CRLF3-202ENST00000577725 ODR4Q5SWX8 454 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 SPATA1Q5VX52 437 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 ANKRD40Q6AI12 368 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 PLPPR4Q7Z2D5 763 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 RNF135Q8IUD6 432 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 MYOCDQ8IZQ8 938 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 ASAP3Q8TDY4 903 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 ATP8B4Q8TF62 1192 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 SCFD1Q8WVM8 642 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 TMEM143Q96AN5 459 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 FAM167AQ96KS9 214 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 FIZ1Q96SL8 496 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 CEP89Q96ST8 783 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 DUSP9Q99956 384 aaKnown RBP11.08□□□□□ -0.64
CRLF3-202ENST00000577725 KIFC3Q9BVG8 833 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 NIFKQ9BYG3 293 aaKnown RBP11.08□□□□□ -0.64
CRLF3-202ENST00000577725 RNPEPQ9H4A4 650 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 SPC25Q9HBM1 224 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 KCND2Q9NZV8 630 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 ODF2LQ9ULJ1 636 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 COL4A4P53420 1690 aaPredicted RBP11.08□□□□□ -0.64
CRLF3-202ENST00000577725 EVPLQ92817 2033 aa11.08□□□□□ -0.64
CRLF3-202ENST00000577725 TRIOO75962 3097 aa11.07□□□□□ -0.64
CRLF3-202ENST00000577725 ZBTB42B2RXF5 422 aa11.07□□□□□ -0.64
CRLF3-202ENST00000577725 K7ENM7 598 aa11.07□□□□□ -0.64
CRLF3-202ENST00000577725 SLC16A4O15374 487 aa11.07□□□□□ -0.64
CRLF3-202ENST00000577725 DUSP11O75319 330 aaKnown RBP11.07□□□□□ -0.64
CRLF3-202ENST00000577725 HOXD13P35453 343 aa11.07□□□□□ -0.64
CRLF3-202ENST00000577725 NBL1P41271 181 aa11.07□□□□□ -0.64
CRLF3-202ENST00000577725 NUBP1P53384 320 aa11.07□□□□□ -0.64
CRLF3-202ENST00000577725 PEX3P56589 373 aa11.07□□□□□ -0.64
CRLF3-202ENST00000577725 TPM4P67936 248 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms