RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ANAPC4Q9UJX5 808 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 FAM187AA6NFU0 413 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 ERVK-9P63128 1117 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 LMNB2Q03252 620 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 KCNK18Q7Z418 384 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 FAM20AQ96MK3 541 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 IFT122Q9HBG6 1241 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 MRPL47Q9HD33 250 aaKnown RBP19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 CCDC195A0A1B0GUA6 201 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 DENND3A2RUS2 1198 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 RPS6KA4O75676 772 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 C3orf67Q6ZVT6 689 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 CATSPER3Q86XQ3 398 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 NSMCE1Q8WV22 266 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 ERP27Q96DN0 273 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 SCOCQ9UIL1 159 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 CLGNO14967 610 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 CYP11B2P19099 503 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 SCP2P22307 547 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 PDIA2Q13087 525 aaKnown RBP19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 CCDC14Q49A88 953 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 MDH1BQ5I0G3 518 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 CENPUQ71F23 418 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 CYFIP1Q7L576 1253 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 SYT2Q8N9I0 419 aaPredicted RBP19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 PPP4R1Q8TF05 950 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 TRPC6Q9Y210 931 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 USP32Q8NFA0 1604 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 IGF2BP3O00425 579 aaKnown RBP eCLIP19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 TRPA1O75762 1119 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 HSPH1Q92598 858 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 TSC22D3Q99576 134 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 ZFP69BQ9UJL9 534 aa19.11■□□□□ 0.65
ATPAF1-214ENST00000576409 SRGAP2CP0DJJ0 459 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 CRKP46108 304 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 EPHB1P54762 984 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 AP3B2Q13367 1082 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 IL17AQ16552 155 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 TTMPQ5BVD1 217 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 CC2D2BQ6DHV5 1058 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 THNSL1Q8IYQ7 743 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 NME8Q8N427 588 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 IL17RBQ9NRM6 502 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 DAGLAQ9Y4D2 1042 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 USP15Q9Y4E8 981 aaPredicted RBP19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 CLTCQ00610 1675 aaKnown RBP19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 FOXN3O00409 490 aaPredicted RBP19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 SKIP12755 728 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 CDC25CP30307 473 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 POLR2BP30876 1174 aaKnown RBP19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 TMPRSS15P98073 1019 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 C7orf31Q8N865 590 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 KCTD6Q8NC69 237 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 SLC13A1Q9BZW2 595 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 L3MBTL1Q9Y468 752 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 ZNF233A6NK53 670 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 TLR3O15455 904 aaKnown RBP19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 CFLARO15519 480 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 CYTH3O43739 400 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 MED24O75448 989 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 NCF2P19878 526 aaPredicted RBP19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 PRELPP51888 382 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 HAUS6Q7Z4H7 955 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 FBXO41Q8TF61 875 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 CCDC97Q96F63 343 aaPredicted RBP19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 STK33Q9BYT3 514 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 SEMA4AQ9H3S1 761 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 NOD2Q9HC29 1040 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 APEX2Q9UBZ4 518 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 FIS1Q9Y3D6 152 aa19.1■□□□□ 0.65
ATPAF1-214ENST00000576409 DNAJC3Q13217 504 aa19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 LRRC36Q1X8D7 754 aa19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 SPIRE2Q8WWL2 714 aa19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 SLC7A3Q8WY07 619 aa19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 NGRNQ9NPE2 291 aaKnown RBP19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 PON1P27169 355 aa19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 HSPA9P38646 679 aaKnown RBP19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 PSMC6P62333 389 aa19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 PPP6R3Q5H9R7 873 aaPredicted RBP19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 AENQ8WTP8 325 aaKnown RBP19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 FAM149B1Q96BN6 582 aa19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 CCDC124Q96CT7 223 aaKnown RBP19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 PI4K2AQ9BTU6 479 aa19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 PALM3A6NDB9 673 aaPredicted RBP19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 K7ERI5 159 aa19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 AKAP3O75969 853 aa19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 HEY1Q9Y5J3 304 aa19.09■□□□□ 0.65
ATPAF1-214ENST00000576409 FOXP2O15409 715 aa19.08■□□□□ 0.65
ATPAF1-214ENST00000576409 SCTRP47872 440 aa19.08■□□□□ 0.65
ATPAF1-214ENST00000576409 TPD52P55327 224 aaPredicted RBP19.08■□□□□ 0.65
ATPAF1-214ENST00000576409 DHX34Q14147 1143 aaKnown RBP19.08■□□□□ 0.65
ATPAF1-214ENST00000576409 SF3B3Q15393 1217 aaKnown RBP19.08■□□□□ 0.65
ATPAF1-214ENST00000576409 GRAMD1BQ3KR37 738 aa19.08■□□□□ 0.65
ATPAF1-214ENST00000576409 PPM1NQ8N819 430 aa19.08■□□□□ 0.65
ATPAF1-214ENST00000576409 PIP4K2CQ8TBX8 421 aa19.08■□□□□ 0.65
ATPAF1-214ENST00000576409 TRIM55Q9BYV6 548 aa19.08■□□□□ 0.65
ATPAF1-214ENST00000576409 FAM237AA0A1B0GTK4 181 aa19.08■□□□□ 0.65
ATPAF1-214ENST00000576409 PDE1CQ14123 709 aaPredicted RBP19.08■□□□□ 0.65
ATPAF1-214ENST00000576409 TMEM179Q6ZVK1 233 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms