RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 MBTD1Q05BQ5 628 aa28.92■■■□□ 2.22
NPLOC4-215ENST00000574095 KHSRPQ92945 711 aaKnown RBP eCLIP28.92■■■□□ 2.22
NPLOC4-215ENST00000574095 NRDE2Q9H7Z3 1164 aa28.92■■■□□ 2.22
NPLOC4-215ENST00000574095 LRWD1Q9UFC0 647 aa28.92■■■□□ 2.22
NPLOC4-215ENST00000574095 CD207Q9UJ71 328 aa28.92■■■□□ 2.22
NPLOC4-215ENST00000574095 RBM10P98175 930 aaKnown RBP28.91■■■□□ 2.22
NPLOC4-215ENST00000574095 PCBP1Q15365 356 aaKnown RBP eCLIP28.91■■■□□ 2.22
NPLOC4-215ENST00000574095 ECM1Q16610 540 aa28.91■■■□□ 2.22
NPLOC4-215ENST00000574095 TMC7Q7Z402 723 aa28.91■■■□□ 2.22
NPLOC4-215ENST00000574095 GJD3Q8N144 294 aa28.91■■■□□ 2.22
NPLOC4-215ENST00000574095 RSPH1Q8WYR4 309 aa28.91■■■□□ 2.22
NPLOC4-215ENST00000574095 MSLNLQ96KJ4 702 aa28.91■■■□□ 2.22
NPLOC4-215ENST00000574095 EIF2AQ9BY44 585 aaKnown RBP28.91■■■□□ 2.22
NPLOC4-215ENST00000574095 GBP3Q9H0R5 595 aa28.91■■■□□ 2.22
NPLOC4-215ENST00000574095 RSAD1Q9HA92 442 aa28.91■■■□□ 2.22
NPLOC4-215ENST00000574095 BARX2Q9UMQ3 279 aaPredicted RBP28.91■■■□□ 2.22
NPLOC4-215ENST00000574095 HIDE1A8MVS5 230 aa28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 AXLP30530 894 aa28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 SSTR3P32745 418 aaPredicted RBP28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 CCT6AP40227 531 aaKnown RBP28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 MCM2P49736 904 aa28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 AFF1P51825 1210 aaKnown RBP28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 RNASELQ05823 741 aaKnown RBP28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 NCBP1Q09161 790 aaKnown RBP28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 AMHR2Q16671 573 aa28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 DUSP6Q16828 381 aa28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 HAUS3Q68CZ6 603 aa28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 NOTUMQ6P988 496 aa28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 PADI6Q6TGC4 694 aa28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 SMG8Q8ND04 991 aaKnown RBP28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 MCPH1Q8NEM0 835 aa28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 NFKBIZQ9BYH8 718 aa28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 EPHX3Q9H6B9 360 aa28.9■■■□□ 2.22
NPLOC4-215ENST00000574095 NCLP19338 710 aaKnown RBP28.89■■■□□ 2.22
NPLOC4-215ENST00000574095 SMAD4Q13485 552 aaKnown RBP28.89■■■□□ 2.22
NPLOC4-215ENST00000574095 TMEM173Q86WV6 379 aaPredicted RBP28.89■■■□□ 2.22
NPLOC4-215ENST00000574095 ZNF280BQ86YH2 543 aa28.89■■■□□ 2.22
NPLOC4-215ENST00000574095 URGCPQ8TCY9 931 aa28.89■■■□□ 2.22
NPLOC4-215ENST00000574095 TMEM169Q96HH4 297 aa28.89■■■□□ 2.22
NPLOC4-215ENST00000574095 NGRNQ9NPE2 291 aaKnown RBP28.89■■■□□ 2.22
NPLOC4-215ENST00000574095 DNAJB4Q9UDY4 337 aa28.89■■■□□ 2.22
NPLOC4-215ENST00000574095 IPPQ9Y573 584 aa28.89■■■□□ 2.22
NPLOC4-215ENST00000574095 C5orf42Q9H799 3197 aa28.89■■■□□ 2.22
NPLOC4-215ENST00000574095 ARHGEF35A5YM69 484 aa28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 LRRIQ4A6NIV6 560 aa28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 B4GALT5O43286 388 aa28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 GALTP07902 379 aa28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 ITGA4P13612 1032 aa28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 ARF4P18085 180 aaPredicted RBP28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 PDIA5Q14554 519 aa28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 SMAD2Q15796 467 aaKnown RBP28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 CNNM3Q8NE01 707 aa28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 VN1R2Q8NFZ6 395 aa28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 CDCA3Q99618 268 aaPredicted RBP28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 CSRNP2Q9H175 543 aa28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 RNF39Q9H2S5 420 aa28.88■■■□□ 2.21
NPLOC4-215ENST00000574095 H3BQV1 296 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 B4GALT3O60512 393 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 DDHD2O94830 711 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 CYP11B2P19099 503 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 MUTP22033 750 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 IL17AQ16552 155 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 CDR2LQ86X02 465 aaPredicted RBP28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 IGSF22Q8N9C0 903 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 CCDC51Q96ER9 411 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 POLD4Q9HCU8 107 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 KIAA1024Q9UPX6 916 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 SMC3Q9UQE7 1217 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 HES2Q9Y543 173 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 CNTNAP2Q9UHC6 1331 aa28.87■■■□□ 2.21
NPLOC4-215ENST00000574095 POMCP01189 267 aa28.86■■■□□ 2.21
NPLOC4-215ENST00000574095 SLC11A1P49279 550 aa28.86■■■□□ 2.21
NPLOC4-215ENST00000574095 ZP2Q05996 745 aa28.86■■■□□ 2.21
NPLOC4-215ENST00000574095 SNX29Q8TEQ0 813 aa28.86■■■□□ 2.21
NPLOC4-215ENST00000574095 IGSF21Q96ID5 467 aa28.86■■■□□ 2.21
NPLOC4-215ENST00000574095 PRKAG3Q9UGI9 489 aa28.86■■■□□ 2.21
NPLOC4-215ENST00000574095 PP2D1A8MPX8 630 aa28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 EYA4O95677 639 aa28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 CA8P35219 290 aa28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 COASYQ13057 564 aa28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 SMC1AQ14683 1233 aaKnown RBP28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 ADHFE1Q8IWW8 467 aa28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 VPS52Q8N1B4 723 aa28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 MRPL43Q8N983 215 aaKnown RBP28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 BCL7CQ8WUZ0 217 aaPredicted RBP28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 BSNDQ8WZ55 320 aa28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 FAM193BQ96PV7 902 aaPredicted RBP28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 APOL6Q9BWW8 343 aa28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 RAB34Q9BZG1 259 aa28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 BHMT2Q9H2M3 363 aa28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 DDX19AQ9NUU7 478 aaKnown RBP28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 KANSL3Q9P2N6 904 aa28.85■■■□□ 2.21
NPLOC4-215ENST00000574095 LAD1O00515 517 aa28.84■■■□□ 2.21
NPLOC4-215ENST00000574095 CXCL14O95715 111 aa28.84■■■□□ 2.21
NPLOC4-215ENST00000574095 RILPL1Q5EBL4 403 aa28.84■■■□□ 2.21
NPLOC4-215ENST00000574095 LLGL2Q6P1M3 1020 aa28.84■■■□□ 2.21
NPLOC4-215ENST00000574095 DTHD1Q6ZMT9 781 aa28.84■■■□□ 2.21
NPLOC4-215ENST00000574095 SMRP1Q8NCR6 262 aa28.84■■■□□ 2.21
NPLOC4-215ENST00000574095 TRIM6Q9C030 488 aaPredicted RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms