RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 FUKQ8N0W3 1084 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 ATXN2LQ8WWM7 1075 aaKnown RBP20.57■□□□□ 0.88
SCARF1-206ENST00000573852 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.57■□□□□ 0.88
SCARF1-206ENST00000573852 RASAL2Q9UJF2 1139 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 CHUKO15111 745 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 GAS7O60861 476 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 MMEP08473 750 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 RRP1BQ14684 758 aaKnown RBP20.57■□□□□ 0.88
SCARF1-206ENST00000573852 C11orf63Q6NUN7 778 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 ZNF746Q6NUN9 644 aaPredicted RBP20.57■□□□□ 0.88
SCARF1-206ENST00000573852 STXBP4Q6ZWJ1 553 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 SYCP3Q8IZU3 236 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 UHMK1Q8TAS1 419 aaKnown RBP20.57■□□□□ 0.88
SCARF1-206ENST00000573852 NACC1Q96RE7 527 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 ZSWIM1Q9BR11 485 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 STRA6Q9BX79 667 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 PCDHA3Q9Y5H8 950 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 RBBP6Q7Z6E9 1792 aaKnown RBP20.57■□□□□ 0.88
SCARF1-206ENST00000573852 SYNGAP1Q96PV0 1343 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 CCDC169A6NNP5 214 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 TISP43B9A030 160 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 CTNNA2P26232 953 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 CHRNA3P32297 505 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 CLUL1Q15846 466 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 PCIF1Q9H4Z3 704 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 GEMIN8Q9NWZ8 242 aaKnown RBP20.56■□□□□ 0.88
SCARF1-206ENST00000573852 USP21Q9UK80 565 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 ODF2LQ9ULJ1 636 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 EMSYQ7Z589 1322 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 MIF4GDA9UHW6 222 aaKnown RBP20.56■□□□□ 0.88
SCARF1-206ENST00000573852 CYB5D1Q6P9G0 228 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 SLC9A9Q8IVB4 645 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 RPUSD2Q8IZ73 545 aaKnown RBP20.56■□□□□ 0.88
SCARF1-206ENST00000573852 DAW1Q8N136 415 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 UBL4BQ8N7F7 174 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 HVCN1Q96D96 273 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 UNC45AQ9H3U1 944 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 PCYOX1Q9UHG3 505 aa20.56■□□□□ 0.88
SCARF1-206ENST00000573852 NRXN2Q9P2S2 1712 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 TCRBV7S2A1N4TA0A589 114 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 BCRP11274 1271 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 COMTP21964 271 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 PEX5P50542 639 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 PPP3CAQ08209 521 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 SF3A3Q12874 501 aaKnown RBP eCLIP20.55■□□□□ 0.88
SCARF1-206ENST00000573852 MESDQ14696 234 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 RGS16O15492 202 aaPredicted RBP20.55■□□□□ 0.88
SCARF1-206ENST00000573852 HIP1RO75146 1068 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 GPC5P78333 572 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 CPNE8Q86YQ8 564 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 PCDHB18PQ96TA0 734 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 KDM4CQ9H3R0 1056 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 ANKRD31Q8N7Z5 1873 aa20.55■□□□□ 0.88
SCARF1-206ENST00000573852 EP400Q96L91 3159 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 ARP10275 920 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 PYGMP11217 842 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 RFX1P22670 979 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 CCDC137Q6PK04 289 aaKnown RBP20.54■□□□□ 0.88
SCARF1-206ENST00000573852 PARP9Q8IXQ6 854 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 CCDC197Q8NCU1 140 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 KAT5Q92993 513 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 MYCBPQ99417 103 aaPredicted RBP20.54■□□□□ 0.88
SCARF1-206ENST00000573852 MTFR1LQ9H019 292 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 ANKRD63C9JTQ0 380 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 HSPA6P17066 643 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 FGFR4P22455 802 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 TCEAL1Q15170 157 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 MAEAQ7L5Y9 396 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 FAM228AQ86W67 206 aa20.54■□□□□ 0.88
SCARF1-206ENST00000573852 EPS8L3Q8TE67 593 aaKnown RBP20.54■□□□□ 0.88
SCARF1-206ENST00000573852 CNOT7Q9UIV1 285 aaKnown RBP20.54■□□□□ 0.88
SCARF1-206ENST00000573852 PFASO15067 1338 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 ATMINO43313 823 aaPredicted RBP20.53■□□□□ 0.88
SCARF1-206ENST00000573852 TRIM37O94972 964 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 ALAS1P13196 640 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 SLCO1A2P46721 670 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 GCLMP48507 274 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 LRRC34Q8IZ02 419 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 GPATCH11Q8N954 259 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 P3H4Q92791 437 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 SGSM3Q96HU1 749 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 LXNQ9BS40 222 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 KCND2Q9NZV8 630 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 TRPC6Q9Y210 931 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 CCT8L1PA6NM43 557 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 PODXLO00592 558 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 SGPL1O95470 568 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 MAP2K2P36507 400 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 XRCC4Q13426 336 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 CEP55Q53EZ4 464 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 C6orf118Q5T5N4 469 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 PAXIP1Q6ZW49 1069 aaPredicted RBP20.53■□□□□ 0.88
SCARF1-206ENST00000573852 ZSWIM2Q8NEG5 633 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 RPS6KC1Q96S38 1066 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 ZNF577Q9BSK1 485 aa20.53■□□□□ 0.88
SCARF1-206ENST00000573852 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.53■□□□□ 0.887e-8■■■■■ 186.3
SCARF1-206ENST00000573852 GHRP10912 638 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 CHRNB2P17787 502 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 ECE1P42892 770 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 C1orf220Q5T0J3 134 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms