RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
ABR-222	ENST00000573667	ITGA4	P13612	1032 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	CYP11B2	P19099	503 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	PDC	P20941	246 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	HOXA11	P31270	313 aa	Predicted RBP	13.23	□□□□□ -0.29
ABR-222	ENST00000573667	PBX3	P40426	434 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	NDUFV1	P49821	464 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	BCAR1	P56945	870 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	MBTD1	Q05BQ5	628 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	PPP2R5A	Q15172	486 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	TMEM132A	Q24JP5	1023 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.23	□□□□□ -0.29
ABR-222	ENST00000573667	RBM23	Q86U06	439 aa	Known RBP	13.23	□□□□□ -0.29
ABR-222	ENST00000573667	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.23	□□□□□ -0.29
ABR-222	ENST00000573667	TMEM169	Q96HH4	297 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	CPB2	Q96IY4	423 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	IFT74	Q96LB3	600 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	C2orf40	Q9H1Z8	148 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	BHMT2	Q9H2M3	363 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	TLE6	Q9H808	572 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	ENTPD7	Q9NQZ7	604 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.23	□□□□□ -0.29
ABR-222	ENST00000573667	KANSL3	Q9P2N6	904 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	DNM3	Q9UQ16	869 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667	VPS37C	A5D8V6	355 aa	Predicted RBP	13.22	□□□□□ -0.29
ABR-222	ENST00000573667	MEIS3P2	A8K0S8	358 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	OFD1	O75665	1012 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	ARF4	P18085	180 aa	Predicted RBP	13.22	□□□□□ -0.29
ABR-222	ENST00000573667	NCL	P19338	710 aa	Known RBP	13.22	□□□□□ -0.29
ABR-222	ENST00000573667	CA8	P35219	290 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
ABR-222	ENST00000573667	NAMPT	P43490	491 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	NRIP1	P48552	1158 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	ERVFC1	P60507	584 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	ATP2C1	P98194	919 aa	Predicted RBP	13.22	□□□□□ -0.29
ABR-222	ENST00000573667	CUL4A	Q13619	759 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	ZRSR1	Q15695	479 aa	Known RBP	13.22	□□□□□ -0.29
ABR-222	ENST00000573667	ECM1	Q16610	540 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	PLPP4	Q5VZY2	271 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	AGMO	Q6ZNB7	445 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	TMC7	Q7Z402	723 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	BRAP	Q7Z569	592 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	MRPL10	Q7Z7H8	261 aa	Known RBP	13.22	□□□□□ -0.29
ABR-222	ENST00000573667	ADGRD2	Q7Z7M1	963 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	SLC39A11	Q8N1S5	342 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	DEPTOR	Q8TB45	409 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	CDK5RAP3	Q96JB5	506 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	PRIMPOL	Q96LW4	560 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	NECAB3	Q96P71	396 aa	Predicted RBP	13.22	□□□□□ -0.29
ABR-222	ENST00000573667	CDCA3	Q99618	268 aa	Predicted RBP	13.22	□□□□□ -0.29
ABR-222	ENST00000573667	TCF25	Q9BQ70	676 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	GBP3	Q9H0R5	595 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	CSRNP2	Q9H175	543 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	NGRN	Q9NPE2	291 aa	Known RBP	13.22	□□□□□ -0.29
ABR-222	ENST00000573667	TBC1D13	Q9NVG8	400 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	CIT	O14578	2027 aa		13.22	□□□□□ -0.29
ABR-222	ENST00000573667	VWA3A	A6NCI4	1184 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	PP2D1	A8MPX8	630 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	NT5C1B-RDH14	C9J2C7	533 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	EYA4	O95677	639 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	SRGAP2B	P0DMP2	458 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	IL9	P15248	144 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	ADAM15	Q13444	863 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	COL19A1	Q14993	1142 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	MAPK6	Q16659	721 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	CTC1	Q2NKJ3	1217 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	UBXN11	Q5T124	520 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.21	□□□□□ -0.29
ABR-222	ENST00000573667	SLC27A1	Q6PCB7	646 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	EFHB	Q8N7U6	833 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	KIFAP3	Q92845	792 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	EIF2A	Q9BY44	585 aa	Known RBP	13.21	□□□□□ -0.29
ABR-222	ENST00000573667	NT5C3A	Q9H0P0	336 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	NRDE2	Q9H7Z3	1164 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	IPP	Q9Y573	584 aa		13.21	□□□□□ -0.29
ABR-222	ENST00000573667	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.21	□□□□□ -0.3
ABR-222	ENST00000573667	GRXCR2	A6NFK2	248 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667		E9PMD0	336 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	FSCN2	O14926	492 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	LINC01565	O15544	149 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	B4GALT5	O43286	388 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	BMP15	O95972	392 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	POMC	P01189	267 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	LIG1	P18858	919 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	CDC25A	P30304	524 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	PRPF4B	Q13523	1007 aa	Known RBP	13.2	□□□□□ -0.3
ABR-222	ENST00000573667	SMC1A	Q14683	1233 aa	Known RBP	13.2	□□□□□ -0.3
ABR-222	ENST00000573667	CLUL1	Q15846	466 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	IL17A	Q16552	155 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	AMHR2	Q16671	573 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.2	□□□□□ -0.3
ABR-222	ENST00000573667	PPP4R3CP	Q6ZMV5	832 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	KCTD17	Q8N5Z5	321 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	TMEM87A	Q8NBN3	555 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	SMG8	Q8ND04	991 aa	Known RBP	13.2	□□□□□ -0.3
ABR-222	ENST00000573667	ADPGK	Q9BRR6	497 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	APOL6	Q9BWW8	343 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	CD207	Q9UJ71	328 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667	PCDHGC5	Q9Y5F6	944 aa		13.2	□□□□□ -0.3
ABR-222	ENST00000573667		A0A1B0GUA9	196 aa		13.19	□□□□□ -0.3

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