RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 TET1Q8NFU7 2136 aa25.64■■□□□ 1.69
TVP23A-206ENST00000572980 PDE4DIPQ5VU43 2346 aa25.63■■□□□ 1.69
TVP23A-206ENST00000572980 GCNT3O95395 438 aa25.63■■□□□ 1.69
TVP23A-206ENST00000572980 EPHB4P54760 987 aa25.63■■□□□ 1.69
TVP23A-206ENST00000572980 GTF2BQ00403 316 aa25.63■■□□□ 1.69
TVP23A-206ENST00000572980 KCNB1Q14721 858 aa25.63■■□□□ 1.69
TVP23A-206ENST00000572980 CAMK4Q16566 473 aa25.63■■□□□ 1.69
TVP23A-206ENST00000572980 ZNF365Q70YC5 407 aa25.63■■□□□ 1.69
TVP23A-206ENST00000572980 GDF15Q99988 308 aa25.63■■□□□ 1.69
TVP23A-206ENST00000572980 CLSTN2Q9H4D0 955 aa25.63■■□□□ 1.69
TVP23A-206ENST00000572980 AGPAT5Q9NUQ2 364 aa25.63■■□□□ 1.69
TVP23A-206ENST00000572980 PCDHA5Q9Y5H7 936 aa25.63■■□□□ 1.69
TVP23A-206ENST00000572980 ABHD14A-ACY1A0A1B0GW23 586 aa25.62■■□□□ 1.69
TVP23A-206ENST00000572980 TSPAN1O60635 241 aa25.62■■□□□ 1.69
TVP23A-206ENST00000572980 EFCAB14O75071 495 aa25.62■■□□□ 1.69
TVP23A-206ENST00000572980 PRPF4BQ13523 1007 aaKnown RBP25.62■■□□□ 1.69
TVP23A-206ENST00000572980 AMHR2Q16671 573 aa25.62■■□□□ 1.69
TVP23A-206ENST00000572980 TMEM240Q5SV17 173 aa25.62■■□□□ 1.69
TVP23A-206ENST00000572980 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.62■■□□□ 1.69
TVP23A-206ENST00000572980 NUP62CLQ9H1M0 184 aa25.62■■□□□ 1.69
TVP23A-206ENST00000572980 TMX1Q9H3N1 280 aa25.62■■□□□ 1.69
TVP23A-206ENST00000572980 TBX20Q9UMR3 447 aa25.62■■□□□ 1.69
TVP23A-206ENST00000572980 PIN4Q9Y237 131 aaKnown RBP25.62■■□□□ 1.69
TVP23A-206ENST00000572980 BAIAP3O94812 1187 aa25.61■■□□□ 1.69
TVP23A-206ENST00000572980 RHOBTB3O94955 611 aa25.61■■□□□ 1.69
TVP23A-206ENST00000572980 TMEM132AQ24JP5 1023 aa25.61■■□□□ 1.69
TVP23A-206ENST00000572980 ZC2HC1CQ53FD0 456 aaPredicted RBP25.61■■□□□ 1.69
TVP23A-206ENST00000572980 SPATA20Q8TB22 786 aa25.61■■□□□ 1.69
TVP23A-206ENST00000572980 HPS3Q969F9 1004 aa25.61■■□□□ 1.69
TVP23A-206ENST00000572980 HVCN1Q96D96 273 aa25.61■■□□□ 1.69
TVP23A-206ENST00000572980 MRPL4Q9BYD3 311 aaKnown RBP25.61■■□□□ 1.69
TVP23A-206ENST00000572980 UBE2OQ9C0C9 1292 aaKnown RBP25.61■■□□□ 1.69
TVP23A-206ENST00000572980 OTOP2Q7RTS6 562 aa25.61■■□□□ 1.69
TVP23A-206ENST00000572980 TAS1R3Q7RTX0 852 aa25.61■■□□□ 1.69
TVP23A-206ENST00000572980 ERCC4Q92889 916 aaPredicted RBP25.61■■□□□ 1.69
TVP23A-206ENST00000572980 CNTNAP2Q9UHC6 1331 aa25.6■■□□□ 1.69
TVP23A-206ENST00000572980 CEP290O15078 2479 aa25.6■■□□□ 1.69
TVP23A-206ENST00000572980 ARF4P18085 180 aaPredicted RBP25.6■■□□□ 1.69
TVP23A-206ENST00000572980 HOXA11P31270 313 aaPredicted RBP25.6■■□□□ 1.69
TVP23A-206ENST00000572980 NOTUMQ6P988 496 aa25.6■■□□□ 1.69
TVP23A-206ENST00000572980 ADAM2Q99965 735 aa25.6■■□□□ 1.69
TVP23A-206ENST00000572980 STRA6Q9BX79 667 aa25.6■■□□□ 1.69
TVP23A-206ENST00000572980 MTIF3Q9H2K0 278 aaKnown RBP25.6■■□□□ 1.69
TVP23A-206ENST00000572980 SLC39A2Q9NP94 309 aa25.6■■□□□ 1.69
TVP23A-206ENST00000572980 B4GALT5O43286 388 aa25.59■■□□□ 1.69
TVP23A-206ENST00000572980 PPP1R37O75864 691 aa25.59■■□□□ 1.69
TVP23A-206ENST00000572980 MYBP10242 640 aa25.59■■□□□ 1.69
TVP23A-206ENST00000572980 SARSP49591 514 aaKnown RBP25.59■■□□□ 1.69
TVP23A-206ENST00000572980 CASP5P51878 434 aa25.59■■□□□ 1.69
TVP23A-206ENST00000572980 TCTN1Q2MV58 587 aa25.59■■□□□ 1.69
TVP23A-206ENST00000572980 CCDC51Q96ER9 411 aa25.59■■□□□ 1.69
TVP23A-206ENST00000572980 CPB2Q96IY4 423 aa25.59■■□□□ 1.69
TVP23A-206ENST00000572980 GTPBP4Q9BZE4 634 aaKnown RBP25.59■■□□□ 1.69
TVP23A-206ENST00000572980 A0A1B0GUA9 196 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 RBAK-RBAKDNI3L0D1 243 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 EIF3DO15371 548 aaKnown RBP eCLIP25.58■■□□□ 1.69
TVP23A-206ENST00000572980 BMP8BP34820 402 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 STK4Q13043 487 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 DSC3Q14574 896 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 NT5DC1Q5TFE4 455 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 TWF2Q6IBS0 349 aaKnown RBP25.58■■□□□ 1.69
TVP23A-206ENST00000572980 ZPBP2Q6X784 338 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 MAP4K3Q8IVH8 894 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 HERVK_113Q902F9 699 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 BICD1Q96G01 975 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 ACCSQ96QU6 501 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 FGFBP2Q9BYJ0 223 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 TSPYL2Q9H2G4 693 aaPredicted RBP25.58■■□□□ 1.69
TVP23A-206ENST00000572980 RGS18Q9NS28 235 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 C1orf112Q9NSG2 853 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 KIAA1468Q9P260 1216 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 EXOC7Q9UPT5 735 aa25.58■■□□□ 1.69
TVP23A-206ENST00000572980 ENPP3O14638 875 aa25.57■■□□□ 1.68
TVP23A-206ENST00000572980 L1TD1Q5T7N2 865 aaKnown RBP25.57■■□□□ 1.68
TVP23A-206ENST00000572980 ATF7IP2Q5U623 682 aa25.57■■□□□ 1.68
TVP23A-206ENST00000572980 TARS2Q9BW92 718 aaKnown RBP25.57■■□□□ 1.68
TVP23A-206ENST00000572980 TMEM206Q9H813 350 aa25.57■■□□□ 1.68
TVP23A-206ENST00000572980 ZBBXA8MT70 800 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 N4BP3O15049 544 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 MGEA5O60502 916 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 KCNJ6P48051 423 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 SLC24A5Q71RS6 500 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 EPM2AIP1Q7L775 607 aaPredicted RBP25.56■■□□□ 1.68
TVP23A-206ENST00000572980 RTN4RL1Q86UN2 441 aaPredicted RBP25.56■■□□□ 1.68
TVP23A-206ENST00000572980 GLIS3Q8NEA6 775 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 ACO2Q99798 780 aaKnown RBP25.56■■□□□ 1.68
TVP23A-206ENST00000572980 TRAIPQ9BWF2 469 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 TNFSF13BQ9Y275 285 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 USP20Q9Y2K6 914 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 TTLL13PA6NNM8 815 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 HNRNPDLO14979 420 aaKnown RBP25.56■■□□□ 1.68
TVP23A-206ENST00000572980 PRPF6O94906 941 aaKnown RBP25.56■■□□□ 1.68
TVP23A-206ENST00000572980 KIF20AO95235 890 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 EDN1P05305 212 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 LIG4P49917 911 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 SLC27A1Q6PCB7 646 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 APBB1IPQ7Z5R6 666 aaPredicted RBP25.56■■□□□ 1.68
TVP23A-206ENST00000572980 SYCP3Q8IZU3 236 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 KIAA0895Q8NCT3 520 aa25.56■■□□□ 1.68
TVP23A-206ENST00000572980 ZNF507Q8TCN5 953 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms