RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 EDRF1Q3B7T1 1238 aa16.39■□□□□ 0.21
CIITA-204ENST00000570546 DAGLBQ8NCG7 672 aa16.39■□□□□ 0.21
CIITA-204ENST00000570546 DNAJC7Q99615 494 aa16.39■□□□□ 0.21
CIITA-204ENST00000570546 APEX2Q9UBZ4 518 aa16.39■□□□□ 0.21
CIITA-204ENST00000570546 KRT37O76014 449 aa16.39■□□□□ 0.21
CIITA-204ENST00000570546 NCAPHQ15003 741 aa16.39■□□□□ 0.21
CIITA-204ENST00000570546 SUPT20HL1Q3ZLR7 823 aa16.39■□□□□ 0.21
CIITA-204ENST00000570546 SLC27A3Q5K4L6 730 aa16.39■□□□□ 0.21
CIITA-204ENST00000570546 LRGUKQ96M69 825 aa16.39■□□□□ 0.21
CIITA-204ENST00000570546 ECT2Q9H8V3 914 aa16.39■□□□□ 0.21
CIITA-204ENST00000570546 COPEO14579 308 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 TBXAS1P24557 533 aaPredicted RBP16.38■□□□□ 0.21
CIITA-204ENST00000570546 KLHL38Q2WGJ6 581 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 KIAA1755Q5JYT7 1200 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 ENOSF1Q7L5Y1 443 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 HAUS6Q7Z4H7 955 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 CLEC10AQ8IUN9 316 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 RHOT1Q8IXI2 618 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 KLC2Q9H0B6 622 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 SCOCQ9UIL1 159 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 CYP26A1O43174 497 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 RAD51CO43502 376 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 CIAPIN1Q6FI81 312 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 MTRQ99707 1265 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 GABBR1Q9UBS5 961 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 MYO3BQ8WXR4 1341 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 MEFVO15553 781 aaPredicted RBP16.38■□□□□ 0.21
CIITA-204ENST00000570546 C21orf2O43822 256 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 OSBPP22059 807 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 GPD1LQ8N335 351 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 TBC1D16Q8TBP0 767 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 ZFP69BQ9UJL9 534 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 FMO5P49326 533 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 ZNF699Q32M78 642 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 VCX3AQ9NNX9 186 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 TLK1Q9UKI8 766 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 ACTN3Q08043 901 aaPredicted RBP16.38■□□□□ 0.21
CIITA-204ENST00000570546 FBXL13Q8NEE6 735 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 RPS6KC1Q96S38 1066 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 POLR3FQ9H1D9 316 aaPredicted RBP16.38■□□□□ 0.21
CIITA-204ENST00000570546 STRIP2Q9ULQ0 834 aa16.38■□□□□ 0.21
CIITA-204ENST00000570546 TBX3O15119 743 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 GPS1Q13098 491 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 IZUMO3Q5VZ72 239 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 TRAPPC11Q7Z392 1133 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 CRLF3Q8IUI8 442 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 HDAC11Q96DB2 347 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 FUT8Q9BYC5 575 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.37■□□□□ 0.21
CIITA-204ENST00000570546 PHF2O75151 1096 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 LMNAP02545 664 aaKnown RBP16.37■□□□□ 0.21
CIITA-204ENST00000570546 ZNF18P17022 549 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 SLC9A1P19634 815 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 NCF2P19878 526 aaPredicted RBP16.37■□□□□ 0.21
CIITA-204ENST00000570546 TMPRSS15P98073 1019 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 CEP55Q53EZ4 464 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 SWSAP1Q6NVH7 229 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 ZIM3Q96PE6 472 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 UBE4BO95155 1302 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 NKX1-1Q15270 411 aaPredicted RBP16.37■□□□□ 0.21
CIITA-204ENST00000570546 SYN2Q92777 582 aaPredicted RBP16.37■□□□□ 0.21
CIITA-204ENST00000570546 CCT8L2Q96SF2 557 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 CCDC68Q9H2F9 335 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 NGRNQ9NPE2 291 aaKnown RBP16.37■□□□□ 0.21
CIITA-204ENST00000570546 SMARCA1P28370 1054 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 HSPA9P38646 679 aaKnown RBP16.37■□□□□ 0.21
CIITA-204ENST00000570546 BYSLQ13895 437 aaKnown RBP16.37■□□□□ 0.21
CIITA-204ENST00000570546 STXBP2Q15833 593 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 HP1BP3Q5SSJ5 553 aaPredicted RBP16.37■□□□□ 0.21
CIITA-204ENST00000570546 ASNSD1Q9NWL6 643 aa16.37■□□□□ 0.21
CIITA-204ENST00000570546 ABL1P00519 1130 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 PRMT1Q99873 361 aaKnown RBP16.36■□□□□ 0.21
CIITA-204ENST00000570546 KLC4Q9NSK0 619 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 TRIM66O15016 1216 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 GYG2O15488 501 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 CARSP49589 748 aaKnown RBP16.36■□□□□ 0.21
CIITA-204ENST00000570546 CCNA1P78396 465 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 DRP2Q13474 957 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 SNRNP48Q6IEG0 339 aaKnown RBP16.36■□□□□ 0.21
CIITA-204ENST00000570546 TRIM72Q6ZMU5 477 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 DPP9Q86TI2 863 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 USP38Q8NB14 1042 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 NSUN6Q8TEA1 469 aaKnown RBP16.36■□□□□ 0.21
CIITA-204ENST00000570546 LRRC4Q9HBW1 653 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 SPATS2LQ9NUQ6 558 aaKnown RBP16.36■□□□□ 0.21
CIITA-204ENST00000570546 AGTP01019 485 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 PLEKP08567 350 aaPredicted RBP16.36■□□□□ 0.21
CIITA-204ENST00000570546 PDIA2Q13087 525 aaKnown RBP16.36■□□□□ 0.21
CIITA-204ENST00000570546 NTRK3Q16288 839 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 ZBED8Q8IZ13 594 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 FBXL16Q8N461 479 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 TTLL6Q8N841 843 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 SPC25Q9HBM1 224 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 FGFR1OP2Q9NVK5 253 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 GPC3P51654 580 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 TFDP2Q14188 446 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 ARHGAP27Q6ZUM4 889 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 OR2W6PQ8NHA6 318 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 LRRC37BQ96QE4 947 aa16.36■□□□□ 0.21
CIITA-204ENST00000570546 JMJD4Q9H9V9 463 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms