RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 IGFALSP35858 605 aa6.82□□□□□ -1.32
CHD9-220ENST00000569794 ZEB1P37275 1124 aaPredicted RBP6.82□□□□□ -1.32
CHD9-220ENST00000569794 VPS72Q15906 364 aa6.82□□□□□ -1.32
CHD9-220ENST00000569794 ZKSCAN2Q63HK3 967 aa6.82□□□□□ -1.32
CHD9-220ENST00000569794 IQSEC1Q6DN90 963 aa6.82□□□□□ -1.32
CHD9-220ENST00000569794 KIAA1841Q6NSI8 718 aa6.82□□□□□ -1.32
CHD9-220ENST00000569794 TIGD7Q6NT04 549 aaPredicted RBP6.82□□□□□ -1.32
CHD9-220ENST00000569794 UNQ6494/PRO21346Q6UXR6 183 aa6.82□□□□□ -1.32
CHD9-220ENST00000569794 PHYKPLQ8IUZ5 450 aa6.82□□□□□ -1.32
CHD9-220ENST00000569794 C7orf31Q8N865 590 aa6.82□□□□□ -1.32
CHD9-220ENST00000569794 GLB1L3Q8NCI6 653 aaPredicted RBP6.82□□□□□ -1.32
CHD9-220ENST00000569794 MYL10Q9BUA6 226 aa6.82□□□□□ -1.32
CHD9-220ENST00000569794 SERHL2Q9H4I8 314 aa6.82□□□□□ -1.32
CHD9-220ENST00000569794 CABP5Q9NP86 173 aa6.82□□□□□ -1.32
CHD9-220ENST00000569794 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.82□□□□□ -1.32
CHD9-220ENST00000569794 PTCH2Q9Y6C5 1203 aa6.82□□□□□ -1.32
CHD9-220ENST00000569794 TMEM200CA6NKL6 621 aa6.81□□□□□ -1.32
CHD9-220ENST00000569794 PLD2O14939 933 aa6.81□□□□□ -1.32
CHD9-220ENST00000569794 PPM1GO15355 546 aaPredicted RBP6.81□□□□□ -1.32
CHD9-220ENST00000569794 DNAJC6O75061 913 aa6.81□□□□□ -1.32
CHD9-220ENST00000569794 ALDH1A2O94788 518 aa6.81□□□□□ -1.32
CHD9-220ENST00000569794 PRPF6O94906 941 aaKnown RBP6.81□□□□□ -1.32
CHD9-220ENST00000569794 RAPGEF3O95398 923 aa6.81□□□□□ -1.32
CHD9-220ENST00000569794 ZNF37AP17032 561 aaPredicted RBP6.81□□□□□ -1.32
CHD9-220ENST00000569794 SLC9A1P19634 815 aa6.81□□□□□ -1.32
CHD9-220ENST00000569794 PPP1R14CQ8TAE6 165 aa6.81□□□□□ -1.32
CHD9-220ENST00000569794 ELF4Q99607 663 aaPredicted RBP6.81□□□□□ -1.32
CHD9-220ENST00000569794 NOL10Q9BSC4 688 aaKnown RBP6.81□□□□□ -1.32
CHD9-220ENST00000569794 NDC1Q9BTX1 674 aa6.81□□□□□ -1.32
CHD9-220ENST00000569794 APOL3O95236 402 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 CD38P28907 300 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 APOBEC3AP31941 199 aaPredicted RBP6.8□□□□□ -1.32
CHD9-220ENST00000569794 GTF2F1P35269 517 aaKnown RBP eCLIP6.8□□□□□ -1.32
CHD9-220ENST00000569794 USP14P54578 494 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 C2orf27AQ580R0 203 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 FAM83AQ86UY5 434 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 UNC5BQ8IZJ1 945 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 LILRA3Q8N6C8 439 aaPredicted RBP6.8□□□□□ -1.32
CHD9-220ENST00000569794 PIK3C3Q8NEB9 887 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 HIST1H2AHQ96KK5 128 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 CLUHP3Q96NS8 147 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 SRPK1Q96SB4 655 aaKnown RBP6.8□□□□□ -1.32
CHD9-220ENST00000569794 HIST1H2AJQ99878 128 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 POLR3GLQ9BT43 218 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 LSM14BQ9BX40 385 aaKnown RBP6.8□□□□□ -1.32
CHD9-220ENST00000569794 EPC1Q9H2F5 836 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 POFUT1Q9H488 388 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 PRDM13Q9H4Q3 707 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 ANKFY1Q9P2R3 1169 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 B4GALT6Q9UBX8 382 aa6.8□□□□□ -1.32
CHD9-220ENST00000569794 ASLP04424 464 aa6.79□□□□□ -1.32
CHD9-220ENST00000569794 CASRP41180 1078 aa6.79□□□□□ -1.32
CHD9-220ENST00000569794 MRPL49Q13405 166 aaKnown RBP6.79□□□□□ -1.32
CHD9-220ENST00000569794 CREB3L3Q68CJ9 461 aa6.79□□□□□ -1.32
CHD9-220ENST00000569794 ARHGEF19Q8IW93 802 aa6.79□□□□□ -1.32
CHD9-220ENST00000569794 SUPT20HQ8NEM7 779 aa6.79□□□□□ -1.32
CHD9-220ENST00000569794 OR5M3Q8NGP4 307 aa6.79□□□□□ -1.32
CHD9-220ENST00000569794 WDR11Q9BZH6 1224 aa6.79□□□□□ -1.32
CHD9-220ENST00000569794 SYBUQ9NX95 663 aa6.79□□□□□ -1.32
CHD9-220ENST00000569794 TRPM5Q9NZQ8 1165 aa6.79□□□□□ -1.32
CHD9-220ENST00000569794 COX11Q9Y6N1 276 aa6.79□□□□□ -1.32
CHD9-220ENST00000569794 DNAJC8O75937 253 aaPredicted RBP6.78□□□□□ -1.32
CHD9-220ENST00000569794 WNT3AP56704 352 aa6.78□□□□□ -1.32
CHD9-220ENST00000569794 RBL2Q08999 1139 aa6.78□□□□□ -1.32
CHD9-220ENST00000569794 ZNF460Q14592 562 aa6.78□□□□□ -1.32
CHD9-220ENST00000569794 CCDC62Q6P9F0 684 aa6.78□□□□□ -1.32
CHD9-220ENST00000569794 DOK3Q7L591 496 aa6.78□□□□□ -1.32
CHD9-220ENST00000569794 GDF7Q7Z4P5 450 aa6.78□□□□□ -1.32
CHD9-220ENST00000569794 R3HDMLQ9H3Y0 253 aa6.78□□□□□ -1.32
CHD9-220ENST00000569794 AKIP1Q9NQ31 210 aa6.78□□□□□ -1.32
CHD9-220ENST00000569794 CHST2Q9Y4C5 530 aa6.78□□□□□ -1.32
CHD9-220ENST00000569794 SPO11Q9Y5K1 396 aa6.78□□□□□ -1.32
CHD9-220ENST00000569794 CBX4O00257 560 aa6.77□□□□□ -1.33
CHD9-220ENST00000569794 RNASET2O00584 256 aaKnown RBP6.77□□□□□ -1.33
CHD9-220ENST00000569794 CD69Q07108 199 aa6.77□□□□□ -1.33
CHD9-220ENST00000569794 PIK3R6Q5UE93 754 aa6.77□□□□□ -1.33
CHD9-220ENST00000569794 RD3Q7Z3Z2 195 aa6.77□□□□□ -1.33
CHD9-220ENST00000569794 RTF1Q92541 710 aaKnown RBP6.77□□□□□ -1.33
CHD9-220ENST00000569794 ARMC5Q96C12 935 aa6.77□□□□□ -1.33
CHD9-220ENST00000569794 IL17RAQ96F46 866 aa6.77□□□□□ -1.33
CHD9-220ENST00000569794 DCLRE1CQ96SD1 692 aaKnown RBP6.77□□□□□ -1.33
CHD9-220ENST00000569794 DKK2Q9UBU2 259 aa6.77□□□□□ -1.33
CHD9-220ENST00000569794 GAGE12BA1L429 117 aa6.76□□□□□ -1.33
CHD9-220ENST00000569794 GAGE12HA6NDE8 117 aa6.76□□□□□ -1.33
CHD9-220ENST00000569794 OPA1O60313 960 aa6.76□□□□□ -1.33
CHD9-220ENST00000569794 NCR1O76036 304 aa6.76□□□□□ -1.33
CHD9-220ENST00000569794 TYRP1P17643 537 aa6.76□□□□□ -1.33
CHD9-220ENST00000569794 KRTAP10-11P60412 298 aa6.76□□□□□ -1.33
CHD9-220ENST00000569794 FNDC3BQ53EP0 1204 aaKnown RBP6.76□□□□□ -1.33
CHD9-220ENST00000569794 LCORLQ8N3X6 602 aa6.76□□□□□ -1.33
CHD9-220ENST00000569794 MKL1Q969V6 931 aa6.76□□□□□ -1.33
CHD9-220ENST00000569794 TOMM22Q9NS69 142 aa6.76□□□□□ -1.33
CHD9-220ENST00000569794 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHD9-220ENST00000569794 HDAC5Q9UQL6 1122 aa6.76□□□□□ -1.33
CHD9-220ENST00000569794 EPN1Q9Y6I3 576 aaPredicted RBP6.76□□□□□ -1.33
CHD9-220ENST00000569794 LEFTY2O00292 366 aa6.75□□□□□ -1.33
CHD9-220ENST00000569794 PCDH8O95206 1070 aa6.75□□□□□ -1.33
CHD9-220ENST00000569794 LY86O95711 162 aa6.75□□□□□ -1.33
CHD9-220ENST00000569794 AVPR1BP47901 424 aa6.75□□□□□ -1.33
CHD9-220ENST00000569794 BEAN1Q3B7T3 259 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms