RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 RBM43Q6ZSC3 357 aaKnown RBP17.28■□□□□ 0.36
SPG7-218ENST00000568205 KIAA0895Q8NCT3 520 aa17.28■□□□□ 0.36
SPG7-218ENST00000568205 SEPT8Q92599 483 aa17.28■□□□□ 0.36
SPG7-218ENST00000568205 HVCN1Q96D96 273 aa17.28■□□□□ 0.36
SPG7-218ENST00000568205 VWCEQ96DN2 955 aa17.28■□□□□ 0.36
SPG7-218ENST00000568205 PRIMPOLQ96LW4 560 aa17.28■□□□□ 0.36
SPG7-218ENST00000568205 LBHD1Q9BQE6 289 aaPredicted RBP17.28■□□□□ 0.36
SPG7-218ENST00000568205 IFIH1Q9BYX4 1025 aaKnown RBP17.28■□□□□ 0.36
SPG7-218ENST00000568205 TBX20Q9UMR3 447 aa17.28■□□□□ 0.36
SPG7-218ENST00000568205 MKI67P46013 3256 aaKnown RBP17.28■□□□□ 0.36
SPG7-218ENST00000568205 BIN1O00499 593 aa17.27■□□□□ 0.36
SPG7-218ENST00000568205 ACKR2O00590 384 aa17.27■□□□□ 0.36
SPG7-218ENST00000568205 EIF3DO15371 548 aaKnown RBP eCLIP17.27■□□□□ 0.36
SPG7-218ENST00000568205 B4GALT5O43286 388 aa17.27■□□□□ 0.36
SPG7-218ENST00000568205 EDN1P05305 212 aa17.27■□□□□ 0.36
SPG7-218ENST00000568205 PPIGQ13427 754 aaKnown RBP eCLIP17.27■□□□□ 0.368e-15■■■□□ 16.8
SPG7-218ENST00000568205 PRPF4BQ13523 1007 aaKnown RBP17.27■□□□□ 0.36
SPG7-218ENST00000568205 L1TD1Q5T7N2 865 aaKnown RBP17.27■□□□□ 0.36
SPG7-218ENST00000568205 EPM2AIP1Q7L775 607 aaPredicted RBP17.27■□□□□ 0.36
SPG7-218ENST00000568205 MAP4K3Q8IVH8 894 aa17.27■□□□□ 0.36
SPG7-218ENST00000568205 RPUSD2Q8IZ73 545 aaKnown RBP17.27■□□□□ 0.36
SPG7-218ENST00000568205 DBF4BQ8NFT6 615 aa17.27■□□□□ 0.36
SPG7-218ENST00000568205 GTPBP4Q9BZE4 634 aaKnown RBP17.27■□□□□ 0.36
SPG7-218ENST00000568205 IL23AQ9NPF7 189 aa17.27■□□□□ 0.36
SPG7-218ENST00000568205 AGPAT5Q9NUQ2 364 aa17.27■□□□□ 0.36
SPG7-218ENST00000568205 UBE4BO95155 1302 aa17.26■□□□□ 0.35
SPG7-218ENST00000568205 CNTNAP2Q9UHC6 1331 aa17.26■□□□□ 0.35
SPG7-218ENST00000568205 PRPF6O94906 941 aaKnown RBP17.26■□□□□ 0.35
SPG7-218ENST00000568205 PFKMP08237 780 aa17.26■□□□□ 0.35
SPG7-218ENST00000568205 MORC3Q14149 939 aa17.26■□□□□ 0.35
SPG7-218ENST00000568205 ZNF658Q5TYW1 1059 aaPredicted RBP17.26■□□□□ 0.35
SPG7-218ENST00000568205 TRIML1Q8N9V2 468 aa17.26■□□□□ 0.35
SPG7-218ENST00000568205 SCFD1Q8WVM8 642 aa17.26■□□□□ 0.35
SPG7-218ENST00000568205 APBB2Q92870 758 aa17.26■□□□□ 0.35
SPG7-218ENST00000568205 ACCSQ96QU6 501 aa17.26■□□□□ 0.35
SPG7-218ENST00000568205 MRPL4Q9BYD3 311 aaKnown RBP17.26■□□□□ 0.35
SPG7-218ENST00000568205 TMX1Q9H3N1 280 aa17.26■□□□□ 0.35
SPG7-218ENST00000568205 PIN4Q9Y237 131 aaKnown RBP17.26■□□□□ 0.35
SPG7-218ENST00000568205 USP20Q9Y2K6 914 aa17.26■□□□□ 0.35
SPG7-218ENST00000568205 GDAQ9Y2T3 454 aa17.26■□□□□ 0.35
SPG7-218ENST00000568205 TANC1Q9C0D5 1861 aa17.26■□□□□ 0.35
SPG7-218ENST00000568205 TTLL13PA6NNM8 815 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 ARF4P18085 180 aaPredicted RBP17.25■□□□□ 0.35
SPG7-218ENST00000568205 AXLP30530 894 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 HOXA11P31270 313 aaPredicted RBP17.25■□□□□ 0.35
SPG7-218ENST00000568205 NCBP1Q09161 790 aaKnown RBP17.25■□□□□ 0.35
SPG7-218ENST00000568205 KCNA1Q09470 495 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 BMT2Q1RMZ1 405 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 TMEM132AQ24JP5 1023 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 TCTN1Q2MV58 587 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 ISM2Q6H9L7 571 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 CNKSR3Q6P9H4 555 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 FAM43BQ6ZT52 329 aaPredicted RBP17.25■□□□□ 0.35
SPG7-218ENST00000568205 SMYD4Q8IYR2 804 aaPredicted RBP17.25■□□□□ 0.35
SPG7-218ENST00000568205 MYOCDQ8IZQ8 938 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 ZNF507Q8TCN5 953 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 BICD1Q96G01 975 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 TARS2Q9BW92 718 aaKnown RBP17.25■□□□□ 0.35
SPG7-218ENST00000568205 CHST12Q9NRB3 414 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 EXOC7Q9UPT5 735 aa17.25■□□□□ 0.35
SPG7-218ENST00000568205 CEP290O15078 2479 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 PIGRP01833 764 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 ACRP10323 421 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 BMP6P22004 513 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 HOXD13P35453 343 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 DSC3Q14574 896 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 ATF7IP2Q5U623 682 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 NOTUMQ6P988 496 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 ZPBP2Q6X784 338 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 NELFCDQ8IXH7 590 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 GUF1Q8N442 669 aaKnown RBP17.24■□□□□ 0.35
SPG7-218ENST00000568205 CCDC51Q96ER9 411 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 CPB2Q96IY4 423 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 ACO2Q99798 780 aaKnown RBP17.24■□□□□ 0.35
SPG7-218ENST00000568205 FTHL17Q9BXU8 183 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 TMEM206Q9H813 350 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 SIP14410 1827 aa17.24■□□□□ 0.35
SPG7-218ENST00000568205 A0A1B0GUA9 196 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 H0YGN5 161 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 HNRNPDLO14979 420 aaKnown RBP17.23■□□□□ 0.35
SPG7-218ENST00000568205 N4BP3O15049 544 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 MGEA5O60502 916 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 KIF20AO95235 890 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 ZSCAN20P17040 1043 aaPredicted RBP17.23■□□□□ 0.35
SPG7-218ENST00000568205 MAGEA10P43363 369 aaPredicted RBP17.23■□□□□ 0.35
SPG7-218ENST00000568205 LIG4P49917 911 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 EPHB4P54760 987 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 MLLT1Q03111 559 aaPredicted RBP17.23■□□□□ 0.35
SPG7-218ENST00000568205 COBLL1Q53SF7 1204 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 PSRC1Q6PGN9 363 aaPredicted RBP17.23■□□□□ 0.35
SPG7-218ENST00000568205 C16orf59Q7L2K0 433 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 SYCP3Q8IZU3 236 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 IKZF4Q9H2S9 585 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 PDZD7Q9H5P4 517 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 MAPK8IP1Q9UQF2 711 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 TNFSF13BQ9Y275 285 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 ZMYM2Q9UBW7 1377 aa17.23■□□□□ 0.35
SPG7-218ENST00000568205 TOM1L1O75674 476 aa17.22■□□□□ 0.35
SPG7-218ENST00000568205 KNOP1Q1ED39 458 aaKnown RBP17.22■□□□□ 0.35
SPG7-218ENST00000568205 EEF1DP3Q658K8 133 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms