RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 GKAP1Q5VSY0 366 aaPredicted RBP6.99□□□□□ -1.29
GINS3-206ENST00000567143 DENND2CQ68D51 928 aa6.99□□□□□ -1.29
GINS3-206ENST00000567143 CDC42EP5Q6NZY7 148 aa6.99□□□□□ -1.29
GINS3-206ENST00000567143 FAM178BQ8IXR5 827 aa6.99□□□□□ -1.29
GINS3-206ENST00000567143 PPM1KQ8N3J5 372 aa6.99□□□□□ -1.29
GINS3-206ENST00000567143 C1orf54Q8WWF1 131 aa6.99□□□□□ -1.29
GINS3-206ENST00000567143 HVCN1Q96D96 273 aa6.99□□□□□ -1.29
GINS3-206ENST00000567143 EIF2AK1Q9BQI3 630 aaKnown RBP6.99□□□□□ -1.29
GINS3-206ENST00000567143 NUCKS1Q9H1E3 243 aaKnown RBP6.99□□□□□ -1.29
GINS3-206ENST00000567143 COG5Q9UP83 839 aa6.99□□□□□ -1.29
GINS3-206ENST00000567143 ASTN1O14525 1302 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 F5H6K3 240 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 F8VZ95 297 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 MEIS2O14770 477 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 CALUO43852 315 aaPredicted RBP6.98□□□□□ -1.29
GINS3-206ENST00000567143 GNA14O95837 355 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 FTLP02792 175 aaPredicted RBP6.98□□□□□ -1.29
GINS3-206ENST00000567143 ECE1P42892 770 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 C1QTNF8P60827 252 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 KLRC3Q07444 240 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 EPHA7Q15375 998 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 PPP4R3AQ6IN85 833 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 RUFY4Q6ZNE9 571 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 CCDC91Q7Z6B0 441 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 ARFGAP2Q8N6H7 521 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 PRPF38AQ8NAV1 312 aaKnown RBP6.98□□□□□ -1.29
GINS3-206ENST00000567143 ERMNQ8TAM6 284 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 SCFD2Q8WU76 684 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 N4BP2L2Q92802 583 aaPredicted RBP6.98□□□□□ -1.29
GINS3-206ENST00000567143 MYCBPQ99417 103 aaPredicted RBP6.98□□□□□ -1.29
GINS3-206ENST00000567143 NCAPGQ9BPX3 1015 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 DDX23Q9BUQ8 820 aaKnown RBP6.98□□□□□ -1.29
GINS3-206ENST00000567143 KIFC3Q9BVG8 833 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 HEMGNQ9BXL5 484 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 CFHR5Q9BXR6 569 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 MYOZ2Q9NPC6 264 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 CNOT7Q9UIV1 285 aaKnown RBP6.98□□□□□ -1.29
GINS3-206ENST00000567143 KDM3AQ9Y4C1 1321 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 PHIPQ8WWQ0 1821 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 SPDYE2BA6NHP3 402 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 H0YGN5 161 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 TGFB1I1O43294 461 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 TRAPPC3O43617 180 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 GH2P01242 217 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 SPDYE6P0CI01 402 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 DLATP10515 647 aaKnown RBP6.98□□□□□ -1.29
GINS3-206ENST00000567143 SCP2P22307 547 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 NT5C2P49902 561 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 ERFP50548 548 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 IFI16Q16666 785 aaKnown RBP6.98□□□□□ -1.29
GINS3-206ENST00000567143 CYB5D1Q6P9G0 228 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 HS2ST1Q7LGA3 356 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 REM2Q8IYK8 340 aaPredicted RBP6.98□□□□□ -1.29
GINS3-206ENST00000567143 LRRC34Q8IZ02 419 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 ZKSCAN4Q969J2 545 aaPredicted RBP6.98□□□□□ -1.29
GINS3-206ENST00000567143 DNAJC18Q9H819 358 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 RRAGCQ9HB90 399 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 CREBZFQ9NS37 354 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 RNF14Q9UBS8 474 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 SLC12A6Q9UHW9 1150 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 ALG6Q9Y672 507 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 NFS1Q9Y697 457 aa6.98□□□□□ -1.29
GINS3-206ENST00000567143 LOC285556D6RIA3 1793 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 GOLGA6L10A0A0M3HER8 536 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 ESYT2A0FGR8 921 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 CLRN2A0PK11 232 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 TBC1D12O60347 775 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 RPL13P26373 211 aaKnown RBP6.97□□□□□ -1.29
GINS3-206ENST00000567143 NF2P35240 595 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 SCTRP47872 440 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 APLP1P51693 650 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 CUL1Q13616 776 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 LRCH2Q5VUJ6 765 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 LMBRD2Q68DH5 695 aaPredicted RBP6.97□□□□□ -1.29
GINS3-206ENST00000567143 ZNF572Q7Z3I7 529 aaPredicted RBP6.97□□□□□ -1.29
GINS3-206ENST00000567143 FBXO11Q86XK2 927 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 JAMLQ86YT9 394 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 APOBEC3FQ8IUX4 373 aaKnown RBP6.97□□□□□ -1.29
GINS3-206ENST00000567143 PRCCQ92733 491 aaPredicted RBP6.97□□□□□ -1.29
GINS3-206ENST00000567143 RNF25Q96BH1 459 aaPredicted RBP6.97□□□□□ -1.29
GINS3-206ENST00000567143 IQCDQ96DY2 449 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 PBKQ96KB5 322 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 TRIM7Q9C029 511 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 CXorf56Q9H5V9 222 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 VCPKMTQ9H867 229 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 SIX2Q9NPC8 291 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 NMRK2Q9NPI5 230 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 GINM1Q9NU53 330 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 INTS9Q9NV88 658 aaKnown RBP6.97□□□□□ -1.29
GINS3-206ENST00000567143 TRIM33Q9UPN9 1127 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 MYBL1P10243 752 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 SOX5P35711 763 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 PMS2P54278 862 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 SOX10P56693 466 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 JAG1P78504 1218 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 MYL7Q01449 175 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 NAA25Q14CX7 972 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 ACCSLQ4AC99 568 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 PHLDB3Q6NSJ2 640 aa6.97□□□□□ -1.29
GINS3-206ENST00000567143 RINT1Q6NUQ1 792 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms