RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 ZNF280BQ86YH2 543 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 ZNF713Q8N859 430 aaPredicted RBP18.97■□□□□ 0.63
CDH3-205ENST00000566808 ZBTB44Q8NCP5 570 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 HDAC7Q8WUI4 952 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 ZNF707Q96C28 371 aaPredicted RBP18.97■□□□□ 0.63
CDH3-205ENST00000566808 PGBD4Q96DM1 585 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 SLC12A7Q9Y666 1083 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 DOCK6Q96HP0 2047 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 COL4A3Q01955 1670 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 KANSL1LA0AUZ9 987 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 WDR64B1ANS9 1081 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 ZNF862O60290 1169 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 CYP3A4P08684 503 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 MICU3Q86XE3 530 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 RAB11FIP4Q86YS3 637 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 FANCBQ8NB91 859 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 CRYGNQ8WXF5 182 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 PHKBQ93100 1093 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 DDX23Q9BUQ8 820 aaKnown RBP18.96■□□□□ 0.63
CDH3-205ENST00000566808 OSBPL6Q9BZF3 934 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 PIDD1Q9HB75 910 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 NRBP2Q9NSY0 501 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 ZSCAN32Q9NX65 697 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 ZDHHC7Q9NXF8 308 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 USP18Q9UMW8 372 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 SAMM50Q9Y512 469 aa18.96■□□□□ 0.63
CDH3-205ENST00000566808 ZFP37Q9Y6Q3 630 aaPredicted RBP18.96■□□□□ 0.63
CDH3-205ENST00000566808 DCDC2BA2VCK2 349 aa18.95■□□□□ 0.62
CDH3-205ENST00000566808 LILRB5O75023 590 aa18.95■□□□□ 0.62
CDH3-205ENST00000566808 C1RP00736 705 aa18.95■□□□□ 0.62
CDH3-205ENST00000566808 GLUD2P49448 558 aa18.95■□□□□ 0.62
CDH3-205ENST00000566808 FAM193BQ96PV7 902 aaPredicted RBP18.95■□□□□ 0.62
CDH3-205ENST00000566808 INO80BQ9C086 356 aaPredicted RBP18.95■□□□□ 0.62
CDH3-205ENST00000566808 RWDD1Q9H446 243 aaPredicted RBP18.95■□□□□ 0.62
CDH3-205ENST00000566808 PLEKHA4Q9H4M7 779 aa18.95■□□□□ 0.62
CDH3-205ENST00000566808 FAN1Q9Y2M0 1017 aa18.95■□□□□ 0.62
CDH3-205ENST00000566808 TDRD15B5MCY1 1934 aaKnown RBP18.95■□□□□ 0.62
CDH3-205ENST00000566808 CNTNAP2Q9UHC6 1331 aa18.95■□□□□ 0.62
CDH3-205ENST00000566808 ZFYVE26Q68DK2 2539 aa18.94■□□□□ 0.62
CDH3-205ENST00000566808 SMCO2A6NFE2 343 aa18.94■□□□□ 0.62
CDH3-205ENST00000566808 DDHD2O94830 711 aa18.94■□□□□ 0.62
CDH3-205ENST00000566808 ALDH2P05091 517 aa18.94■□□□□ 0.62
CDH3-205ENST00000566808 PRKCQQ04759 706 aa18.94■□□□□ 0.62
CDH3-205ENST00000566808 CSTF1Q05048 431 aaKnown RBP18.94■□□□□ 0.62
CDH3-205ENST00000566808 MLF2Q15773 248 aaPredicted RBP18.94■□□□□ 0.62
CDH3-205ENST00000566808 ZNF410Q86VK4 478 aa18.94■□□□□ 0.62
CDH3-205ENST00000566808 NELL1Q92832 810 aa18.94■□□□□ 0.62
CDH3-205ENST00000566808 RXFP1Q9HBX9 757 aa18.94■□□□□ 0.62
CDH3-205ENST00000566808 KANSL3Q9P2N6 904 aa18.94■□□□□ 0.62
CDH3-205ENST00000566808 FRYQ5TBA9 3013 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 A0A087WZ62 844 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 NRP1O14786 923 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 TBC1D4O60343 1298 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 DRP2Q13474 957 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 AAMPQ13685 434 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 UBXN2BQ14CS0 331 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 RSPO2Q6UXX9 243 aaPredicted RBP18.93■□□□□ 0.62
CDH3-205ENST00000566808 AGMOQ6ZNB7 445 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 RNF168Q8IYW5 571 aaPredicted RBP18.93■□□□□ 0.62
CDH3-205ENST00000566808 FDXACB1Q9BRP7 624 aaPredicted RBP18.93■□□□□ 0.62
CDH3-205ENST00000566808 NT5C3AQ9H0P0 336 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 RSAD1Q9HA92 442 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 MARCH5Q9NX47 278 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 BARHL2Q9NY43 387 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 GMEB2Q9UKD1 530 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 PCDHB2Q9Y5E7 798 aa18.93■□□□□ 0.62
CDH3-205ENST00000566808 TGM1P22735 817 aa18.92■□□□□ 0.62
CDH3-205ENST00000566808 DNM2P50570 870 aa18.92■□□□□ 0.62
CDH3-205ENST00000566808 GPC5P78333 572 aa18.92■□□□□ 0.62
CDH3-205ENST00000566808 SNW1Q13573 536 aaKnown RBP18.92■□□□□ 0.62
CDH3-205ENST00000566808 CATSPER4Q7RTX7 472 aa18.92■□□□□ 0.62
CDH3-205ENST00000566808 CHAMP1Q96JM3 812 aa18.92■□□□□ 0.62
CDH3-205ENST00000566808 PRKD2Q9BZL6 878 aa18.92■□□□□ 0.62
CDH3-205ENST00000566808 DISC1Q9NRI5 854 aa18.92■□□□□ 0.62
CDH3-205ENST00000566808 AGPAT5Q9NUQ2 364 aa18.92■□□□□ 0.62
CDH3-205ENST00000566808 RBM28Q9NW13 759 aaKnown RBP18.92■□□□□ 0.62
CDH3-205ENST00000566808 EFEMP2O95967 443 aa18.91■□□□□ 0.62
CDH3-205ENST00000566808 MYBP10242 640 aa18.91■□□□□ 0.62
CDH3-205ENST00000566808 GSPT1P15170 499 aaKnown RBP18.91■□□□□ 0.62
CDH3-205ENST00000566808 DSG1Q02413 1049 aa18.91■□□□□ 0.62
CDH3-205ENST00000566808 TARBP2Q15633 366 aaKnown RBP18.91■□□□□ 0.62
CDH3-205ENST00000566808 UGCGQ16739 394 aa18.91■□□□□ 0.62
CDH3-205ENST00000566808 PPM1JQ5JR12 505 aa18.91■□□□□ 0.62
CDH3-205ENST00000566808 JAKMIP3Q5VZ66 844 aa18.91■□□□□ 0.62
CDH3-205ENST00000566808 MTSS1LQ765P7 747 aa18.91■□□□□ 0.62
CDH3-205ENST00000566808 SGMS1Q86VZ5 419 aa18.91■□□□□ 0.62
CDH3-205ENST00000566808 NETO1Q8TDF5 533 aa18.91■□□□□ 0.62
CDH3-205ENST00000566808 FGF14Q92915 247 aa18.91■□□□□ 0.62
CDH3-205ENST00000566808 MAP4K1Q92918 833 aa18.91■□□□□ 0.62
CDH3-205ENST00000566808 FAM126AQ9BYI3 521 aaPredicted RBP18.91■□□□□ 0.62
CDH3-205ENST00000566808 PARD6AQ9NPB6 346 aa18.91■□□□□ 0.62
CDH3-205ENST00000566808 PRMT8Q9NR22 394 aaPredicted RBP18.91■□□□□ 0.62
CDH3-205ENST00000566808 PRG3Q9Y2Y8 225 aaPredicted RBP18.91■□□□□ 0.62
CDH3-205ENST00000566808 RBM8AQ9Y5S9 174 aaKnown RBP18.91■□□□□ 0.62
CDH3-205ENST00000566808 FASNP49327 2511 aaKnown RBP18.91■□□□□ 0.62
CDH3-205ENST00000566808 RALGAPA1Q6GYQ0 2036 aa18.9■□□□□ 0.62
CDH3-205ENST00000566808 FAM170BA6NMN3 283 aa18.9■□□□□ 0.62
CDH3-205ENST00000566808 SGSM2O43147 1006 aa18.9■□□□□ 0.62
CDH3-205ENST00000566808 CHMLP26374 656 aa18.9■□□□□ 0.62
CDH3-205ENST00000566808 AFF1P51825 1210 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms