RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 TPH2Q8IWU9 490 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 FAM178BQ8IXR5 827 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 PIGOQ8TEQ8 1089 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 AGBL1Q96MI9 1066 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 AFG3L2Q9Y4W6 797 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 COL11A1P12107 1806 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-213ENST00000566756 P4HA2O15460 535 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 MAPTP10636 758 aaKnown RBP18.15■□□□□ 0.5
CMTM3-213ENST00000566756 DGKZQ13574 1117 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 SH3D19Q5HYK7 790 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 GJB7Q6PEY0 223 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 YTHDF3Q7Z739 585 aaKnown RBP18.15■□□□□ 0.5
CMTM3-213ENST00000566756 ZFP91Q96JP5 570 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-213ENST00000566756 GPR88Q9GZN0 384 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 INTS2Q9H0H0 1204 aaKnown RBP18.15■□□□□ 0.5
CMTM3-213ENST00000566756 GOLPH3Q9H4A6 298 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 ADAMTS5Q9UNA0 930 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 FZD1Q9UP38 647 aa18.15■□□□□ 0.5
CMTM3-213ENST00000566756 GAS7O60861 476 aa18.14■□□□□ 0.49
CMTM3-213ENST00000566756 ZBED4O75132 1171 aa18.14■□□□□ 0.49
CMTM3-213ENST00000566756 UAP1Q16222 522 aaPredicted RBP18.14■□□□□ 0.49
CMTM3-213ENST00000566756 PTGISQ16647 500 aa18.14■□□□□ 0.49
CMTM3-213ENST00000566756 CEP55Q53EZ4 464 aa18.14■□□□□ 0.49
CMTM3-213ENST00000566756 SLC35G2Q8TBE7 412 aa18.14■□□□□ 0.49
CMTM3-213ENST00000566756 CLEC4DQ8WXI8 215 aa18.14■□□□□ 0.49
CMTM3-213ENST00000566756 AP1M1Q9BXS5 423 aa18.14■□□□□ 0.49
CMTM3-213ENST00000566756 DDX47Q9H0S4 455 aaKnown RBP18.14■□□□□ 0.49
CMTM3-213ENST00000566756 RAB17Q9H0T7 212 aa18.14■□□□□ 0.49
CMTM3-213ENST00000566756 UTP11Q9Y3A2 253 aaKnown RBP18.14■□□□□ 0.49
CMTM3-213ENST00000566756 UTRNP46939 3433 aa18.14■□□□□ 0.49
CMTM3-213ENST00000566756 ANKRD62A6NC57 917 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 SFI1A8K8P3 1242 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 VWA5AO00534 786 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 DDX3YO15523 660 aaKnown RBP18.13■□□□□ 0.49
CMTM3-213ENST00000566756 BUB1BO60566 1050 aaPredicted RBP18.13■□□□□ 0.49
CMTM3-213ENST00000566756 ATP1A2P50993 1020 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 OAZ1P54368 228 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 PTENP60484 403 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 SAMD1Q6SPF0 538 aaPredicted RBP18.13■□□□□ 0.49
CMTM3-213ENST00000566756 RHOT2Q8IXI1 618 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 RIT2Q99578 217 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 PFASO15067 1338 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 HMGCS2P54868 508 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 MYL7Q01449 175 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 BFSP1Q12934 665 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 PLS1Q14651 629 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 ZC2HC1CQ53FD0 456 aaPredicted RBP18.13■□□□□ 0.49
CMTM3-213ENST00000566756 GLYCTKQ8IVS8 523 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 C12orf56Q8IXR9 622 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.13■□□□□ 0.49
CMTM3-213ENST00000566756 TMOD4Q9NZQ9 345 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 SNCAIPQ9Y6H5 919 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 MYPNQ86TC9 1320 aa18.13■□□□□ 0.49
CMTM3-213ENST00000566756 FAM187AA6NFU0 413 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 GLTPD2A6NH11 291 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 TULP1O00294 542 aaPredicted RBP18.12■□□□□ 0.49
CMTM3-213ENST00000566756 BCRP11274 1271 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 HSPA6P17066 643 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 DSG3P32926 999 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 EPHX2P34913 555 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 CTNNA1P35221 906 aaKnown RBP18.12■□□□□ 0.49
CMTM3-213ENST00000566756 EIF3BP55884 814 aaKnown RBP18.12■□□□□ 0.49
CMTM3-213ENST00000566756 ZNF844Q08AG5 666 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 CBWD6Q4V339 395 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 CBWD3Q5JTY5 395 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 CBWD5Q5RIA9 395 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 TMC3Q7Z5M5 1100 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 TEKT3Q9BXF9 490 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 BCAS3Q9H6U6 928 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 RAVER2Q9HCJ3 691 aaKnown RBP18.12■□□□□ 0.49
CMTM3-213ENST00000566756 AMACRQ9UHK6 382 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 USP20Q9Y2K6 914 aa18.12■□□□□ 0.49
CMTM3-213ENST00000566756 CTDP1Q9Y5B0 961 aaPredicted RBP18.12■□□□□ 0.49
CMTM3-213ENST00000566756 GOLGA6L10A0A0M3HER8 536 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 MIF4GDA9UHW6 222 aaKnown RBP18.11■□□□□ 0.49
CMTM3-213ENST00000566756 ADM5C9JUS6 153 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 MAPK13O15264 365 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 PMM2O15305 246 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 GRIN3BO60391 1043 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 FAM107AO95990 144 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 TNFAIP3P21580 790 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 DRG2P55039 364 aaKnown RBP18.11■□□□□ 0.49
CMTM3-213ENST00000566756 MCCD1P59942 119 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-213ENST00000566756 SNRPFP62306 86 aaKnown RBP18.11■□□□□ 0.49
CMTM3-213ENST00000566756 VGLL4Q14135 290 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 DHX34Q14147 1143 aaKnown RBP18.11■□□□□ 0.49
CMTM3-213ENST00000566756 COG2Q14746 738 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 ODR4Q5SWX8 454 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 CATSPERGQ6ZRH7 1159 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 PACS2Q86VP3 889 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 CPXCR1Q8N123 301 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 LMO3Q8TAP4 145 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 MAF1Q9H063 256 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 NEUROG2Q9H2A3 272 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 TMEM206Q9H813 350 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 RPTORQ8N122 1335 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 ATP2A1O14983 1001 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 ERLIN2O94905 339 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 ALAS1P13196 640 aa18.11■□□□□ 0.49
CMTM3-213ENST00000566756 ITGA4P13612 1032 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms