RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 ERGIC2Q96RQ1 377 aa19.34■□□□□ 0.69
HERC2-208ENST00000566635 CCDC113Q9H0I3 377 aa19.34■□□□□ 0.69
HERC2-208ENST00000566635 TMEM134Q9H6X4 195 aa19.34■□□□□ 0.69
HERC2-208ENST00000566635 PYCARDQ9ULZ3 195 aa19.34■□□□□ 0.69
HERC2-208ENST00000566635 AKT3Q9Y243 479 aa19.34■□□□□ 0.69
HERC2-208ENST00000566635 DNAH12Q6ZR08 3092 aa19.34■□□□□ 0.69
HERC2-208ENST00000566635 RNF225M0QZC1 329 aaPredicted RBP19.33■□□□□ 0.69
HERC2-208ENST00000566635 VTNP04004 478 aa19.33■□□□□ 0.69
HERC2-208ENST00000566635 RARBP10826 455 aa19.33■□□□□ 0.69
HERC2-208ENST00000566635 CASP14P31944 242 aa19.33■□□□□ 0.69
HERC2-208ENST00000566635 LIG4P49917 911 aa19.33■□□□□ 0.69
HERC2-208ENST00000566635 FXR1P51114 621 aaKnown RBP eCLIP19.33■□□□□ 0.69
HERC2-208ENST00000566635 KCNH2Q12809 1159 aa19.33■□□□□ 0.69
HERC2-208ENST00000566635 PPFIBP1Q86W92 1011 aa19.33■□□□□ 0.69
HERC2-208ENST00000566635 SLC35C1Q96A29 364 aa19.33■□□□□ 0.69
HERC2-208ENST00000566635 UPF3AQ9H1J1 476 aaKnown RBP19.33■□□□□ 0.69
HERC2-208ENST00000566635 SIK3Q9Y2K2 1263 aa19.33■□□□□ 0.69
HERC2-208ENST00000566635 TTLL13PA6NNM8 815 aa19.33■□□□□ 0.68
HERC2-208ENST00000566635 ADRB2P07550 413 aa19.33■□□□□ 0.68
HERC2-208ENST00000566635 ZBTB8OSQ8IWT0 167 aa19.33■□□□□ 0.68
HERC2-208ENST00000566635 POMGNT1Q8WZA1 660 aa19.33■□□□□ 0.68
HERC2-208ENST00000566635 PCMTD1Q96MG8 357 aaPredicted RBP19.33■□□□□ 0.68
HERC2-208ENST00000566635 TARS2Q9BW92 718 aaKnown RBP19.33■□□□□ 0.68
HERC2-208ENST00000566635 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.33■□□□□ 0.68
HERC2-208ENST00000566635 MFAP3LO75121 409 aa19.32■□□□□ 0.68
HERC2-208ENST00000566635 TRIM49P0CI25 452 aa19.32■□□□□ 0.68
HERC2-208ENST00000566635 TRIM49CP0CI26 452 aa19.32■□□□□ 0.68
HERC2-208ENST00000566635 SCP2P22307 547 aa19.32■□□□□ 0.68
HERC2-208ENST00000566635 TFDP1Q14186 410 aa19.32■□□□□ 0.68
HERC2-208ENST00000566635 GNASQ5JWF2 1037 aa19.32■□□□□ 0.68
HERC2-208ENST00000566635 MAP3K21Q5TCX8 1036 aa19.32■□□□□ 0.68
HERC2-208ENST00000566635 NFRKBQ6P4R8 1299 aa19.32■□□□□ 0.68
HERC2-208ENST00000566635 HAPLN2Q9GZV7 340 aa19.32■□□□□ 0.68
HERC2-208ENST00000566635 XPNPEP3Q9NQH7 507 aa19.32■□□□□ 0.68
HERC2-208ENST00000566635 NRCAMQ92823 1304 aa19.32■□□□□ 0.68
HERC2-208ENST00000566635 ESPNB1AK53 854 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 AKR1B15C9JRZ8 316 aaPredicted RBP19.31■□□□□ 0.68
HERC2-208ENST00000566635 MSCO60682 206 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 ADAMTS4O75173 837 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 GNRH1P01148 92 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 PIGRP01833 764 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 AFPP02771 609 aaKnown RBP19.31■□□□□ 0.68
HERC2-208ENST00000566635 EFNA5P52803 228 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 KCNMA1Q12791 1236 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 CBWD2Q8IUF1 395 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 ZBTB45Q96K62 511 aaPredicted RBP19.31■□□□□ 0.68
HERC2-208ENST00000566635 C2orf40Q9H1Z8 148 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 MINDY3Q9H8M7 445 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 RRN3P2A6NIE6 340 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 PRKCBP05771 671 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 TMOD1P28289 359 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 BFSP1Q12934 665 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 CRACR2AQ9BSW2 395 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 KATNAL1Q9BW62 490 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 TTYH3Q9C0H2 523 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 ANKFY1Q9P2R3 1169 aa19.31■□□□□ 0.68
HERC2-208ENST00000566635 TRIP12Q14669 1992 aaPredicted RBP19.31■□□□□ 0.68
HERC2-208ENST00000566635 A0A087WZ62 844 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 EPHB6O15197 1021 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 ASAP2O43150 1006 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 GARTP22102 1010 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 PTENP60484 403 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 MBTD1Q05BQ5 628 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 PPP2R3AQ06190 1150 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 TRIM14Q14142 442 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 SNRNP35Q16560 246 aaKnown RBP19.3■□□□□ 0.68
HERC2-208ENST00000566635 CXCL17Q6UXB2 119 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 RUFY4Q6ZNE9 571 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 KIAA0319LQ8IZA0 1049 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 PLEKHO2Q8TD55 490 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 MAP7D2Q96T17 732 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 FDXACB1Q9BRP7 624 aaPredicted RBP19.3■□□□□ 0.68
HERC2-208ENST00000566635 FAM49AQ9H0Q0 323 aaPredicted RBP19.3■□□□□ 0.68
HERC2-208ENST00000566635 MMRN2Q9H8L6 949 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 IFT122Q9HBG6 1241 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 SPC25Q9HBM1 224 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 FAM207AQ9NSI2 230 aaPredicted RBP19.3■□□□□ 0.68
HERC2-208ENST00000566635 SCN10AQ9Y5Y9 1956 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 TTC26A0AVF1 554 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 MYCNP04198 464 aaPredicted RBP19.3■□□□□ 0.68
HERC2-208ENST00000566635 TRIM21P19474 475 aaKnown RBP19.3■□□□□ 0.68
HERC2-208ENST00000566635 DLG4P78352 724 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 ZNF200P98182 395 aaPredicted RBP19.3■□□□□ 0.68
HERC2-208ENST00000566635 MAPK6Q16659 721 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 PXYLP1Q8TE99 480 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 HDAC6Q9UBN7 1215 aa19.3■□□□□ 0.68
HERC2-208ENST00000566635 MBLAC1A4D2B0 266 aaPredicted RBP19.29■□□□□ 0.68
HERC2-208ENST00000566635 INO80B-WBP1J3KQ70 363 aa19.29■□□□□ 0.68
HERC2-208ENST00000566635 CSDE1O75534 798 aaKnown RBP19.29■□□□□ 0.68
HERC2-208ENST00000566635 INHAP05111 366 aa19.29■□□□□ 0.68
HERC2-208ENST00000566635 SKILP12757 684 aa19.29■□□□□ 0.68
HERC2-208ENST00000566635 MSNP26038 577 aaKnown RBP19.29■□□□□ 0.68
HERC2-208ENST00000566635 APBA1Q02410 837 aa19.29■□□□□ 0.68
HERC2-208ENST00000566635 TMEM139Q8IV31 216 aa19.29■□□□□ 0.68
HERC2-208ENST00000566635 C17orf53Q8N3J3 647 aaPredicted RBP19.29■□□□□ 0.68
HERC2-208ENST00000566635 MTG1Q9BT17 334 aaPredicted RBP19.29■□□□□ 0.68
HERC2-208ENST00000566635 INO80BQ9C086 356 aaPredicted RBP19.29■□□□□ 0.68
HERC2-208ENST00000566635 STYXL1Q9Y6J8 313 aa19.29■□□□□ 0.68
HERC2-208ENST00000566635 B4GALT5O43286 388 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 TPM1P09493 284 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms