RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 GPRASP2Q96D09 838 aa20.27■□□□□ 0.84
MSLN-207ENST00000566549 FAM84AQ96KN4 292 aa20.27■□□□□ 0.84
MSLN-207ENST00000566549 A1CFQ9NQ94 594 aaKnown RBP20.27■□□□□ 0.84
MSLN-207ENST00000566549 TOPORSQ9NS56 1045 aaPredicted RBP20.27■□□□□ 0.84
MSLN-207ENST00000566549 CHORDC1Q9UHD1 332 aaPredicted RBP20.27■□□□□ 0.84
MSLN-207ENST00000566549 INTUQ9ULD6 942 aa20.27■□□□□ 0.84
MSLN-207ENST00000566549 NOC2LQ9Y3T9 749 aaKnown RBP20.27■□□□□ 0.84
MSLN-207ENST00000566549 A0A0A6YYK5 440 aaPredicted RBP20.26■□□□□ 0.83
MSLN-207ENST00000566549 FAM153BP0C7A2 387 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 FDX1P10109 184 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 CNGA1P29973 690 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 FAM153CQ494X1 144 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 NT5DC3Q86UY8 548 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 C12orf56Q8IXR9 622 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 IFT20Q8IY31 132 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 PPM1KQ8N3J5 372 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 AGPAT1Q99943 283 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 CYP39A1Q9NYL5 469 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 SEPT9Q9UHD8 586 aaPredicted RBP20.26■□□□□ 0.83
MSLN-207ENST00000566549 FAM153AQ9UHL3 310 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 TMEM253P0C7T8 217 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 GUCY2FP51841 1108 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 CCDC60Q8IWA6 550 aaPredicted RBP20.26■□□□□ 0.83
MSLN-207ENST00000566549 RFFLQ8WZ73 363 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 RUBCNQ92622 972 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 PBKQ96KB5 322 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 ST6GALNAC4Q9H4F1 302 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 JPH1Q9HDC5 661 aaPredicted RBP20.26■□□□□ 0.83
MSLN-207ENST00000566549 PNMA2Q9UL42 364 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 USP20Q9Y2K6 914 aa20.26■□□□□ 0.83
MSLN-207ENST00000566549 TNNC1P63316 161 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 KIF22Q14807 665 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 SLFN11Q7Z7L1 901 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 CASKIN2Q8WXE0 1202 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 TIPINQ9BVW5 301 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 TEX13BQ9BXU2 312 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 PFASO15067 1338 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 ADGRA3Q8IWK6 1321 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 PGRMC1O00264 195 aaKnown RBP20.25■□□□□ 0.83
MSLN-207ENST00000566549 R3HDM1Q15032 1099 aaKnown RBP20.25■□□□□ 0.83
MSLN-207ENST00000566549 MAP4K3Q8IVH8 894 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 RPUSD2Q8IZ73 545 aaKnown RBP20.25■□□□□ 0.83
MSLN-207ENST00000566549 SYCE1Q8N0S2 351 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 SEMA4DQ92854 862 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 ATP6V0A1Q93050 837 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 KLRG1Q96E93 195 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 IWS1Q96ST2 819 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 DDX47Q9H0S4 455 aaKnown RBP20.25■□□□□ 0.83
MSLN-207ENST00000566549 GDF3Q9NR23 364 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 TMOD4Q9NZQ9 345 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 EXOC7Q9UPT5 735 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 STXBP5LQ9Y2K9 1186 aa20.25■□□□□ 0.83
MSLN-207ENST00000566549 ZBTB48P10074 688 aaPredicted RBP20.24■□□□□ 0.83
MSLN-207ENST00000566549 ITGA4P13612 1032 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 SLC39A4Q6P5W5 647 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 EMBQ6PCB8 327 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 CATSPERGQ6ZRH7 1159 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 OTUD6AQ7L8S5 288 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 APOBEC3FQ8IUX4 373 aaKnown RBP20.24■□□□□ 0.83
MSLN-207ENST00000566549 ACAD9Q9H845 621 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 AMFRQ9UKV5 643 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 COG5Q9UP83 839 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 KRIT1O00522 736 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 SGPL1O95470 568 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 DLATP10515 647 aaKnown RBP20.24■□□□□ 0.83
MSLN-207ENST00000566549 CAPN2P17655 700 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 RFX1P22670 979 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 PRKCEQ02156 737 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 PRPF4BQ13523 1007 aaKnown RBP20.24■□□□□ 0.83
MSLN-207ENST00000566549 XRRA1Q6P2D8 792 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 POMGNT1Q8WZA1 660 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.24■□□□□ 0.83
MSLN-207ENST00000566549 SUCLA2Q9P2R7 463 aaPredicted RBP20.24■□□□□ 0.83
MSLN-207ENST00000566549 SLC9A2Q9UBY0 812 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 TMEM59LQ9UK28 342 aa20.24■□□□□ 0.83
MSLN-207ENST00000566549 NCANO14594 1321 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 PSAPP07602 524 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 ACTR2P61160 394 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 FSTL1Q12841 308 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 NAA35Q5VZE5 725 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 NLGN2Q8NFZ4 835 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 ACTRT1Q8TDG2 376 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 BICD1Q96G01 975 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 SPDYE16A6NNV3 312 aaPredicted RBP20.23■□□□□ 0.83
MSLN-207ENST00000566549 CES2O00748 559 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 HNRNPDLO14979 420 aaKnown RBP20.23■□□□□ 0.83
MSLN-207ENST00000566549 P4HA2O15460 535 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 FTLP02792 175 aaPredicted RBP20.23■□□□□ 0.83
MSLN-207ENST00000566549 MTERF2Q49AM1 385 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 ADAT2Q7Z6V5 191 aaKnown RBP20.23■□□□□ 0.83
MSLN-207ENST00000566549 HES6Q96HZ4 224 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 C12orf42Q96LP6 360 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 KREMEN1Q96MU8 473 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 ADAMTS5Q9UNA0 930 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 LOXHD1Q8IVV2 1947 aa20.23■□□□□ 0.83
MSLN-207ENST00000566549 DOCK1Q14185 1865 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 ANKRD62A6NC57 917 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 C19orf81C9J6K1 198 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 CYP26A1O43174 497 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 ATMINO43313 823 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms