RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 ELMO3Q96BJ8 720 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 CCDC127Q96BQ5 260 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 BICD1Q96G01 975 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 C16orf70Q9BSU1 422 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.37□□□□□ -0.43
LINC00562-201ENST00000566385 ZNHIT6Q9NWK9 470 aaKnown RBP12.37□□□□□ -0.43
LINC00562-201ENST00000566385 EXOC7Q9UPT5 735 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 IGKV6-21A0A0C4DH24 114 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 K7ERI5 159 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 INSRRP14616 1297 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 EIF4A3P38919 411 aaKnown RBP12.37□□□□□ -0.43
LINC00562-201ENST00000566385 ARHGAP25P42331 645 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 CLCN3P51790 818 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 WNT7BP56706 349 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 MAP2K5Q13163 448 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 PPP2R5AQ15172 486 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 DUSP28Q4G0W2 176 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 BRDTQ58F21 947 aaPredicted RBP12.37□□□□□ -0.43
LINC00562-201ENST00000566385 CYP4F22Q6NT55 531 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 PPTC7Q8NI37 304 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 DEPTORQ8TB45 409 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 HVCN1Q96D96 273 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 FAM167AQ96KS9 214 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 TARS2Q9BW92 718 aaKnown RBP12.37□□□□□ -0.43
LINC00562-201ENST00000566385 PLCB1Q9NQ66 1216 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 TOPORSQ9NS56 1045 aaPredicted RBP12.37□□□□□ -0.43
LINC00562-201ENST00000566385 ERAP1Q9NZ08 941 aa12.37□□□□□ -0.43
LINC00562-201ENST00000566385 CCP110O43303 1012 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 LAMTOR4Q0VGL1 99 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 RAPGEF1Q13905 1077 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 SEZ6Q53EL9 994 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 INTS8Q75QN2 995 aaKnown RBP12.36□□□□□ -0.43
LINC00562-201ENST00000566385 RHPN2Q8IUC4 686 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 METTL13Q8N6R0 699 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 LMO3Q8TAP4 145 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 IQCDQ96DY2 449 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 CGNQ9P2M7 1197 aaKnown RBP12.36□□□□□ -0.43
LINC00562-201ENST00000566385 DUSP10Q9Y6W6 482 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 SIP14410 1827 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 CSDE1O75534 798 aaKnown RBP12.36□□□□□ -0.43
LINC00562-201ENST00000566385 GNG11P61952 73 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 ZBTB41Q5SVQ8 909 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 EFCAB12Q6NXP0 572 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
LINC00562-201ENST00000566385 RNF149Q8NC42 400 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 PARD3BQ8TEW8 1205 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 TSC1Q92574 1164 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 USP6NLQ92738 828 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 CCDC42Q96M95 316 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 PPP1R16BQ96T49 567 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 FAM213AQ9BRX8 229 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 EDEM3Q9BZQ6 932 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 ARHGAP39Q9C0H5 1083 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 LACRTQ9GZZ8 138 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 GJD2Q9UKL4 321 aa12.36□□□□□ -0.43
LINC00562-201ENST00000566385 GTPBP10A4D1E9 387 aaKnown RBP12.35□□□□□ -0.43
LINC00562-201ENST00000566385 ADCY3O60266 1144 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 HBP1O60381 514 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 KRT13P13646 458 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 ACOT2P49753 483 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 LIG4P49917 911 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 CDK17Q00537 523 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 GFPT1Q06210 699 aaPredicted RBP12.35□□□□□ -0.43
LINC00562-201ENST00000566385 SFMBT2Q5VUG0 894 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 IQCEQ6IPM2 695 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 PHLDB3Q6NSJ2 640 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 EMID1Q96A84 441 aaPredicted RBP12.35□□□□□ -0.43
LINC00562-201ENST00000566385 FBXL18Q96ME1 805 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 ZNF236Q9UL36 1845 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 LRRIQ3A6PVS8 624 aaPredicted RBP12.35□□□□□ -0.43
LINC00562-201ENST00000566385 H3BRB1 525 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 DYNC1LI2O43237 492 aaPredicted RBP12.35□□□□□ -0.43
LINC00562-201ENST00000566385 C22orf31O95567 290 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 SLC26A2P50443 739 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 KIF11P52732 1056 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 INHBEP58166 350 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 NLRP11P59045 1033 aaKnown RBP12.35□□□□□ -0.43
LINC00562-201ENST00000566385 SNRPFP62306 86 aaKnown RBP12.35□□□□□ -0.43
LINC00562-201ENST00000566385 MYL7Q01449 175 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 CAP1Q01518 475 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 TNFAIP2Q03169 654 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 STRN3Q13033 797 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 ASTE1Q2TB18 679 aaPredicted RBP12.35□□□□□ -0.43
LINC00562-201ENST00000566385 TDRD12Q587J7 1177 aaKnown RBP12.35□□□□□ -0.43
LINC00562-201ENST00000566385 IER5Q5VY09 327 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 OLFML2BQ68BL8 750 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 IRF2BP2Q7Z5L9 587 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 KIF18AQ8NI77 898 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 TMEM117Q9H0C3 514 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 TUT1Q9H6E5 874 aaKnown RBP12.35□□□□□ -0.43
LINC00562-201ENST00000566385 MINDY3Q9H8M7 445 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 ZCCHC17Q9NP64 241 aaKnown RBP12.35□□□□□ -0.43
LINC00562-201ENST00000566385 ANKFY1Q9P2R3 1169 aa12.35□□□□□ -0.43
LINC00562-201ENST00000566385 SUCLA2Q9P2R7 463 aaPredicted RBP12.35□□□□□ -0.43
LINC00562-201ENST00000566385 EIF3CLB5ME19 914 aaKnown RBP12.34□□□□□ -0.43
LINC00562-201ENST00000566385 MSCO60682 206 aa12.34□□□□□ -0.43
LINC00562-201ENST00000566385 PPFIA4O75335 1185 aa12.34□□□□□ -0.43
LINC00562-201ENST00000566385 MMP3P08254 477 aa12.34□□□□□ -0.43
LINC00562-201ENST00000566385 IQCF3P0C7M6 154 aa12.34□□□□□ -0.43
LINC00562-201ENST00000566385 ZNF865P0CJ78 1059 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms