RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 EFCAB12Q6NXP0 572 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 APTXQ7Z2E3 356 aaKnown RBP20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 SLC9A9Q8IVB4 645 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 MAP4K3Q8IVH8 894 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 C12orf56Q8IXR9 622 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 DEPTORQ8TB45 409 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 MYLIPQ8WY64 445 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 CNOT6LQ96LI5 555 aaKnown RBP20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 RNPC3Q96LT9 517 aaKnown RBP20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 TMEM134Q9H6X4 195 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 NRCAMQ92823 1304 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 ZMYM2Q9UBW7 1377 aa20.92■□□□□ 0.94
CSPG4P13-201ENST00000565545 GOLGA6L6A8MZA4 724 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 NR3C1P04150 777 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 SIP14410 1827 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 NR2F2P24468 414 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 EFNA5P52803 228 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 COPB1P53618 953 aaKnown RBP20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 MARSP56192 900 aaKnown RBP20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 PURAQ00577 322 aaKnown RBP20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 POU5F1BQ06416 359 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 MKRN4PQ13434 485 aaPredicted RBP20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 KIAA0753Q2KHM9 967 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 MTHFD1LQ6UB35 978 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 LINC01465Q8N7H1 131 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 TRAPPC12Q8WVT3 735 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 PRPF31Q8WWY3 499 aaKnown RBP20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 EVPLQ92817 2033 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 NAP1L5Q96NT1 182 aaPredicted RBP20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 MTG1Q9BT17 334 aaPredicted RBP20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 C2orf40Q9H1Z8 148 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 TMEM39AQ9NV64 488 aa20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 SUCLA2Q9P2R7 463 aaPredicted RBP20.91■□□□□ 0.94
CSPG4P13-201ENST00000565545 DNAH12Q6ZR08 3092 aa20.9■□□□□ 0.94
CSPG4P13-201ENST00000565545 SLC16A3O15427 465 aaKnown RBP20.9■□□□□ 0.94
CSPG4P13-201ENST00000565545 CST5P28325 142 aaPredicted RBP20.9■□□□□ 0.94
CSPG4P13-201ENST00000565545 MTIF2P46199 727 aaKnown RBP20.9■□□□□ 0.94
CSPG4P13-201ENST00000565545 IGBP1P78318 339 aa20.9■□□□□ 0.94
CSPG4P13-201ENST00000565545 BEX3Q00994 111 aa20.9■□□□□ 0.94
CSPG4P13-201ENST00000565545 LAMTOR4Q0VGL1 99 aa20.9■□□□□ 0.94
CSPG4P13-201ENST00000565545 GNASQ5JWF2 1037 aa20.9■□□□□ 0.94
CSPG4P13-201ENST00000565545 DRC7Q8IY82 874 aa20.9■□□□□ 0.94
CSPG4P13-201ENST00000565545 MKNK1Q9BUB5 465 aa20.9■□□□□ 0.94
CSPG4P13-201ENST00000565545 RTN4Q9NQC3 1192 aaKnown RBP20.9■□□□□ 0.94
CSPG4P13-201ENST00000565545 AGPAT3Q9NRZ7 376 aa20.9■□□□□ 0.94
CSPG4P13-201ENST00000565545 A0A1W2PQ45 241 aaPredicted RBP20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 A0A1W2PQY0 241 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 LRRIQ4A6NIV6 560 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 N4BP3O15049 544 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 ADAMTS4O75173 837 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 SMIM10L2AP0DMW4 78 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 SMIM10L2BP0DMW5 78 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 FOSL2P15408 326 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 ITGB8P26012 769 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 CDC42EP1Q00587 391 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 STRN3Q13033 797 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 CAPSQ13938 189 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 CDCA2Q69YH5 1023 aaPredicted RBP20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 FRMD5Q7Z6J6 570 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 CREBRFQ8IUR6 639 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 KSR1Q8IVT5 923 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 ZBTB8OSQ8IWT0 167 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 LRRC71Q8N4P6 559 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 METTL13Q8N6R0 699 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 TUBGCP2Q9BSJ2 902 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 TTYH1Q9H313 450 aaPredicted RBP20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 METTL14Q9HCE5 456 aaKnown RBP20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 DMAC2Q9NW81 257 aa20.89■□□□□ 0.93
CSPG4P13-201ENST00000565545 ADGRA3Q8IWK6 1321 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 K7ERI5 159 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 KIAA0355O15063 1070 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 EPB41P11171 864 aaKnown RBP20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 GNAT1P11488 350 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 PRKCSHP14314 528 aaPredicted RBP20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 FPGSQ05932 587 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 PPP2R3AQ06190 1150 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 DRP2Q13474 957 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 HSP90AA2PQ14568 343 aaPredicted RBP20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 CCDC40Q4G0X9 1142 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 PCSK9Q8NBP7 692 aaKnown RBP20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 KLHDC9Q8NEP7 349 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 MAP7D2Q96T17 732 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 KIFC3Q9BVG8 833 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 NFKBIZQ9BYH8 718 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 STARD7Q9NQZ5 370 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 TAB2Q9NYJ8 693 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 IMPACTQ9P2X3 320 aa20.88■□□□□ 0.93
CSPG4P13-201ENST00000565545 MBLAC1A4D2B0 266 aaPredicted RBP20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 DCDC2CA8MYV0 355 aa20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 CLIC2O15247 247 aa20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 PIGRP01833 764 aa20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 PSMC2P35998 433 aaKnown RBP20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 CLCN3P51790 818 aa20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 EPHB4P54760 987 aa20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 MAN2A1Q16706 1144 aa20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 MARCH8Q5T0T0 291 aa20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 RHPN2Q8IUC4 686 aa20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 VSTM4Q8IW00 320 aa20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 ZNF710Q8N1W2 664 aa20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 LMBR1Q8WVP7 490 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms