RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 TMEM175Q9BSA9 504 aa12.97□□□□□ -0.33
NSMCE1-209ENST00000565384 EMILIN2Q9BXX0 1053 aa12.97□□□□□ -0.33
NSMCE1-209ENST00000565384 MFSD1Q9H3U5 465 aa12.97□□□□□ -0.33
NSMCE1-209ENST00000565384 RSAD1Q9HA92 442 aa12.97□□□□□ -0.33
NSMCE1-209ENST00000565384 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
NSMCE1-209ENST00000565384 STK39Q9UEW8 545 aa12.97□□□□□ -0.33
NSMCE1-209ENST00000565384 VAV3Q9UKW4 847 aa12.97□□□□□ -0.33
NSMCE1-209ENST00000565384 CNTNAP2Q9UHC6 1331 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 POMCP01189 267 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 P4HBP07237 508 aaKnown RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 CNPP09543 421 aaKnown RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 SRGAP2CP0DJJ0 459 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 KLRC2P26717 231 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 AFF1P51825 1210 aaKnown RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 UBXN11Q5T124 520 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 ASTLQ6HA08 431 aaPredicted RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 SRGAP1Q7Z6B7 1085 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 MRPL10Q7Z7H8 261 aaKnown RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 FAM177A1Q8N128 213 aaPredicted RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 ZNF579Q8NAF0 562 aaKnown RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 PRPF31Q8WWY3 499 aaKnown RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 TMEM143Q96AN5 459 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 ACSF2Q96CM8 615 aaPredicted RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 ZNF274Q96GC6 653 aaPredicted RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 SNX27Q96L92 541 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 LARP6Q9BRS8 491 aaKnown RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 SLKQ9H2G2 1235 aaPredicted RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 DHX33Q9H6R0 707 aaKnown RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 MINDY3Q9H8M7 445 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 KCNMB3Q9NPA1 279 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 KANSL3Q9P2N6 904 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 WRAP73Q9P2S5 460 aaPredicted RBP12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 KCNJ14Q9UNX9 436 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 FAN1Q9Y2M0 1017 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 PPME1Q9Y570 386 aa12.96□□□□□ -0.33
NSMCE1-209ENST00000565384 CCDC194A0A1B0GVG4 234 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 NRP1O14786 923 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 LILRB3O75022 631 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 ALDH2P05091 517 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 HOXA11P31270 313 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 RFC5P40937 340 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 CLCN5P51795 746 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 STK3Q13188 491 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 CWF19L1Q69YN2 538 aaKnown RBP12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 CPLX2Q6PUV4 134 aaKnown RBP12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 OTOP3Q7RTS5 596 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 ASCL5Q7RTU5 278 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 NEK8Q86SG6 692 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 EXOC8Q8IYI6 725 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 FLCNQ8NFG4 579 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 FAM20AQ96MK3 541 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 MRPL17Q9NRX2 175 aaKnown RBP12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 MARCH5Q9NX47 278 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 CYP46A1Q9Y6A2 500 aa12.95□□□□□ -0.34
NSMCE1-209ENST00000565384 MYO10Q9HD67 2058 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 C2CD2LO14523 706 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 SOD2P04179 222 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 URODP06132 367 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 NCLP19338 710 aaKnown RBP12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 YWHABP31946 246 aaKnown RBP12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 NBL1P41271 181 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 LAMTOR4Q0VGL1 99 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 TDGQ13569 410 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 EMC2Q15006 297 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 PPP4R3AQ6IN85 833 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 C15orf39Q6ZRI6 1047 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 C4orf19Q8IY42 314 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 RNF149Q8NC42 400 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 CNNM3Q8NE01 707 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 TCP11Q8WWU5 503 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 LXNQ9BS40 222 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 PHF20Q9BVI0 1012 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 HERC2P3Q9BVR0 1158 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 MAN1C1Q9NR34 630 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 DUSP12Q9UNI6 340 aa12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 PRG3Q9Y2Y8 225 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-209ENST00000565384 PRR23AA6NEV1 266 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 TBX3O15119 743 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 ASAP2O43150 1006 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 GAS2O43903 313 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 CCNT1O60563 726 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 ERLIN2O94905 339 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 ITGA4P13612 1032 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 GCFC2P16383 781 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 OR1G1P47890 313 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 AK2P54819 239 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 EPHA7Q15375 998 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 NCAPH2Q6IBW4 605 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 OTUD6AQ7L8S5 288 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 FERMT3Q86UX7 667 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 COLGALT2Q8IYK4 626 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 SMG8Q8ND04 991 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 CMASQ8NFW8 434 aaPredicted RBP12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 HAS1Q92839 578 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 RPS6KC1Q96S38 1066 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 MTRQ99707 1265 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 EIF2AQ9BY44 585 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 KCNK12Q9HB15 430 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 UBN1Q9NPG3 1134 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms