RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 MOXD2PA6NHM9 499 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SPATA31C2B4DYI2 1134 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 EIF3CLB5ME19 914 aaKnown RBP8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 K7ENM7 598 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 NOP56O00567 594 aaKnown RBP8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 DHX15O43143 795 aaKnown RBP8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 DKC1O60832 514 aaKnown RBP eCLIP8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 HIP1RO75146 1068 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MMP3P08254 477 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ZNF286BP0CG31 522 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 TGFB3P10600 412 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 KCNA2P16389 499 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 HNRNPH3P31942 346 aaKnown RBP8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 QARSP47897 775 aaKnown RBP8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PSMC5P62195 406 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SP2Q02086 613 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 NCBP1Q09161 790 aaKnown RBP8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 LAMC2Q13753 1193 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 TUBB2AQ13885 445 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SPA17Q15506 151 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 NFIL3Q16649 462 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ZNF569Q5MCW4 686 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ODR4Q5SWX8 454 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 UTP14CQ5TAP6 766 aaKnown RBP8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 GPR153Q6NV75 609 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PADI6Q6TGC4 694 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 HS2ST1Q7LGA3 356 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 FAM178BQ8IXR5 827 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PPP1R13LQ8WUF5 828 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ANKRD7Q92527 254 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 TSC1Q92574 1164 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 JAKMIP2Q96AA8 810 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CCDC42Q96M95 316 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 GLT1D1Q96MS3 346 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 EIF3CQ99613 913 aaKnown RBP8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CHP1Q99653 195 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 TSEN34Q9BSV6 310 aaKnown RBP8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MKNK1Q9BUB5 465 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 TUBB2BQ9BVA1 445 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 TSGA10Q9BZW7 698 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 DEF6Q9H4E7 631 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 AGPAT5Q9NUQ2 364 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ATP11BQ9Y2G3 1177 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 REV3LO60673 3130 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ZMYM2Q9UBW7 1377 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 A0A0U1RQG5 324 aaPredicted RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CTAGE9A4FU28 777 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 LRRC53A6NM62 1247 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MAFGO15525 162 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 KRT86O43790 486 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 RRP9O43818 475 aaKnown RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 USO1O60763 962 aaKnown RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ATP9AO75110 1047 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 AFPP02771 609 aaKnown RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MAPTP10636 758 aaKnown RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 COL6A1P12109 1028 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 NMT1P30419 496 aaKnown RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ARHGAP25P42331 645 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 RTP1P59025 263 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 KCNH2Q12809 1159 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 DGKDQ16760 1214 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 LRRC26Q2I0M4 334 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 HSDL1Q3SXM5 330 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 DCAF17Q5H9S7 520 aaPredicted RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 FAM47CQ5HY64 1035 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SFMBT2Q5VUG0 894 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CCSAPQ6IQ19 270 aaPredicted RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ZNF746Q6NUN9 644 aaPredicted RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 WDR59Q6PJI9 974 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 METTL7BQ6UX53 244 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SLC39A5Q6ZMH5 540 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ZNF662Q6ZS27 426 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 RRAGAQ7L523 313 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 C4orf19Q8IY42 314 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 C7orf61Q8IZ16 206 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PPTC7Q8NI37 304 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ATP6V0A1Q93050 837 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 DRC1Q96MC2 740 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 NAPGQ99747 312 aaPredicted RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 GDF15Q99988 308 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MTG1Q9BT17 334 aaPredicted RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 NHEJ1Q9H9Q4 299 aaPredicted RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ANKEF1Q9NU02 776 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 LARSQ9P2J5 1176 aaKnown RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CGNQ9P2M7 1197 aaKnown RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 WRAP73Q9P2S5 460 aaPredicted RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SLC9A2Q9UBY0 812 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PLAGL2Q9UPG8 496 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PCDHB13Q9Y5F0 798 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 TRIP12Q14669 1992 aaPredicted RBP8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SCN10AQ9Y5Y9 1956 aa8.11□□□□□ -1.11
MAP1LC3B-205ENST00000564638 NFASCO94856 1347 aa8.1□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SSU72P8A0A1W2PR75 194 aa8.1□□□□□ -1.11
MAP1LC3B-205ENST00000564638 A6NJR5 290 aa8.1□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SFI1A8K8P3 1242 aa8.1□□□□□ -1.11
MAP1LC3B-205ENST00000564638 EPHB6O15197 1021 aa8.1□□□□□ -1.11
MAP1LC3B-205ENST00000564638 AKR1B10O60218 316 aa8.1□□□□□ -1.11
MAP1LC3B-205ENST00000564638 EVI5O60447 810 aa8.1□□□□□ -1.11
MAP1LC3B-205ENST00000564638 KPNA6O60684 536 aa8.1□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PQBP1O60828 265 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms