RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 KCNG1Q9UIX4 513 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 COG5Q9UP83 839 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 INPP5FQ9Y2H2 1132 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 CLIC4Q9Y696 253 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 CCDC169A6NNP5 214 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 GRM6O15303 877 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 TSPAN1O60635 241 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 ITGA4P13612 1032 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 TIE1P35590 1138 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 TXLNAP40222 546 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 KRT17Q04695 432 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 AAK1Q2M2I8 961 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 CLLU1OSQ5K130 101 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 ZNF598Q86UK7 904 aaKnown RBP15.1■□□□□ 0.01
CNOT1-206ENST00000564557 MICAL1Q8TDZ2 1067 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 LPPQ93052 612 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 HLA-CQ95604 372 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 PRIMPOLQ96LW4 560 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 DRC1Q96MC2 740 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 ZNF396Q96N95 335 aaPredicted RBP15.1■□□□□ 0.01
CNOT1-206ENST00000564557 ZNF558Q96NG5 402 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 FAM193BQ96PV7 902 aaPredicted RBP15.1■□□□□ 0.01
CNOT1-206ENST00000564557 MMTAG2Q9BU76 263 aaKnown RBP15.1■□□□□ 0.01
CNOT1-206ENST00000564557 TIPINQ9BVW5 301 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 NSUN3Q9H649 340 aaKnown RBP15.1■□□□□ 0.01
CNOT1-206ENST00000564557 UBN1Q9NPG3 1134 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 PLAGL2Q9UPG8 496 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 CDH23Q9H251 3354 aa15.1■□□□□ 0.01
CNOT1-206ENST00000564557 COL4A4P53420 1690 aaPredicted RBP15.09■□□□□ 0.01
CNOT1-206ENST00000564557 CARNS1A5YM72 827 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 ATMINO43313 823 aaPredicted RBP15.09■□□□□ 0.01
CNOT1-206ENST00000564557 PLA2G4BP0C869 781 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 MARCKSP29966 332 aaPredicted RBP15.09■□□□□ 0.01
CNOT1-206ENST00000564557 HOXA11P31270 313 aaPredicted RBP15.09■□□□□ 0.01
CNOT1-206ENST00000564557 PPM1AP35813 382 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 ALDH7A1P49419 539 aaKnown RBP15.09■□□□□ 0.01
CNOT1-206ENST00000564557 EFNA5P52803 228 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 MRPS5P82675 430 aaKnown RBP15.09■□□□□ 0.01
CNOT1-206ENST00000564557 DMP1Q13316 513 aaPredicted RBP15.09■□□□□ 0.01
CNOT1-206ENST00000564557 NOMO2Q5JPE7 1267 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 HYIQ5T013 277 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 RINT1Q6NUQ1 792 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 FAM173BQ6P4H8 233 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 EP400NLQ6ZTU2 488 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 COLGALT1Q8NBJ5 622 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 POF1BQ8WVV4 589 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 ATXN2LQ8WWM7 1075 aaKnown RBP15.09■□□□□ 0.01
CNOT1-206ENST00000564557 ADPGKQ9BRR6 497 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 CSRNP2Q9H175 543 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 RSAD1Q9HA92 442 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 POLD4Q9HCU8 107 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 PRDM6Q9NQX0 595 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 KANSL3Q9P2N6 904 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 CCDC39Q9UFE4 941 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 FNDC1Q4ZHG4 1894 aaPredicted RBP15.09■□□□□ 0.01
CNOT1-206ENST00000564557 CNTNAP2Q9UHC6 1331 aa15.09■□□□□ 0.01
CNOT1-206ENST00000564557 K7ERI5 159 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 HIP1RO75146 1068 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 FGF18O76093 207 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 ITGB1P05556 798 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 PRKCBP05771 671 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 KRT18P05783 430 aaKnown RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 LINC00271P0C7V0 271 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 ATF7P17544 494 aaPredicted RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 ARF4P18085 180 aaPredicted RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 SMTNP53814 917 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 PEX3P56589 373 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 UBE3AQ05086 875 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 PRPF4BQ13523 1007 aaKnown RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 DHX8Q14562 1220 aaKnown RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 BMS1Q14692 1282 aaKnown RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 STK38Q15208 465 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 FOXD4L5Q5VV16 416 aaPredicted RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 CDCA2Q69YH5 1023 aaPredicted RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 SLC27A1Q6PCB7 646 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 KCNT2Q6UVM3 1135 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 APBB1IPQ7Z5R6 666 aaPredicted RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 MRPL10Q7Z7H8 261 aaKnown RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 SYT2Q8N9I0 419 aaPredicted RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 SPPL3Q8TCT6 385 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 FOXD4L4Q8WXT5 416 aaPredicted RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 SYMPKQ92797 1274 aaKnown RBP15.08■□□□□ 0
CNOT1-206ENST00000564557 PNMA5Q96PV4 448 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 APOL6Q9BWW8 343 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 CWH43Q9H720 699 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 KMT5AQ9NQR1 393 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 RNF19AQ9NV58 838 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 KCND2Q9NZV8 630 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 IPPQ9Y573 584 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 PHLPP2Q6ZVD8 1323 aa15.08■□□□□ 0
CNOT1-206ENST00000564557 N4BP3O15049 544 aa15.07■□□□□ 0
CNOT1-206ENST00000564557 NCK2O43639 380 aa15.07■□□□□ 0
CNOT1-206ENST00000564557 ZC3H11AO75152 810 aaKnown RBP eCLIP15.07■□□□□ 0
CNOT1-206ENST00000564557 OFD1O75665 1012 aa15.07■□□□□ 0
CNOT1-206ENST00000564557 NPTXRO95502 500 aa15.07■□□□□ 0
CNOT1-206ENST00000564557 NCLP19338 710 aaKnown RBP15.07■□□□□ 0
CNOT1-206ENST00000564557 RAD51AP2Q09MP3 1159 aa15.07■□□□□ 0
CNOT1-206ENST00000564557 FAM187BQ17R55 369 aa15.07■□□□□ 0
CNOT1-206ENST00000564557 UBXN11Q5T124 520 aa15.07■□□□□ 0
CNOT1-206ENST00000564557 LRRC55Q6ZSA7 311 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms