RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 B4GALT5O43286 388 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 LPXNO60711 386 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 SSBP05455 408 aaKnown RBP eCLIP19.1■□□□□ 0.65
USB1-209ENST00000564387 GATMP50440 423 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 PEX3P56589 373 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 KRT85P78386 507 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 NCBP1Q09161 790 aaKnown RBP19.1■□□□□ 0.65
USB1-209ENST00000564387 GIT2Q14161 759 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 BTG3Q14201 252 aaPredicted RBP19.1■□□□□ 0.65
USB1-209ENST00000564387 ADGRE1Q14246 886 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 E2F4Q16254 413 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 MAPK6Q16659 721 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 CLLU1OSQ5K130 101 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 RASSF8Q8NHQ8 419 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 LEO1Q8WVC0 666 aaPredicted RBP19.1■□□□□ 0.65
USB1-209ENST00000564387 MYLIPQ8WY64 445 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 REEP2Q9BRK0 252 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 C17orf80Q9BSJ5 609 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 TMEM117Q9H0C3 514 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 PCDHB2Q9Y5E7 798 aa19.1■□□□□ 0.65
USB1-209ENST00000564387 PHLPP2Q6ZVD8 1323 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 NPHP3-ACAD11A0A0J9YXS1 232 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 TTLL13PA6NNM8 815 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 SFI1A8K8P3 1242 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 EDN1P05305 212 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 FGFR1P11362 822 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 NCLP19338 710 aaKnown RBP19.09■□□□□ 0.65
USB1-209ENST00000564387 BMPR1AP36894 532 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 DMP1Q13316 513 aaPredicted RBP19.09■□□□□ 0.65
USB1-209ENST00000564387 EPC2Q52LR7 807 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 RESP18Q5W5W9 173 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 TAS1R3Q7RTX0 852 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 TMEM192Q8IY95 271 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 SMG8Q8ND04 991 aaKnown RBP19.09■□□□□ 0.65
USB1-209ENST00000564387 CNNM3Q8NE01 707 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 KIFC3Q9BVG8 833 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 RWDD3Q9Y3V2 267 aa19.09■□□□□ 0.65
USB1-209ENST00000564387 MRPL42Q9Y6G3 142 aaKnown RBP19.09■□□□□ 0.65
USB1-209ENST00000564387 MYO9BQ13459 2157 aa19.08■□□□□ 0.65
USB1-209ENST00000564387 NLRC5Q86WI3 1866 aa19.08■□□□□ 0.65
USB1-209ENST00000564387 INPPL1O15357 1258 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 PRKCBP05771 671 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 RB1P06400 928 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 SCP2P22307 547 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 ME1P48163 572 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 RAD51AP2Q09MP3 1159 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 SLC27A1Q6PCB7 646 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 AGMOQ6ZNB7 445 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 TMEM161BQ8NDZ6 487 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 ARNTL2Q8WYA1 636 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 CPB2Q96IY4 423 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 CHAMP1Q96JM3 812 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 FIZ1Q96SL8 496 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 PLVAPQ9BX97 442 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 EIF2AQ9BY44 585 aaKnown RBP19.08■□□□□ 0.64
USB1-209ENST00000564387 SCAND2PQ9GZW5 306 aaPredicted RBP19.08■□□□□ 0.64
USB1-209ENST00000564387 CWH43Q9H720 699 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 CERS4Q9HA82 394 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 KMT5AQ9NQR1 393 aa19.08■□□□□ 0.64
USB1-209ENST00000564387 LARSQ9P2J5 1176 aaKnown RBP19.08■□□□□ 0.64
USB1-209ENST00000564387 EYSQ5T1H1 3165 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 MYH11P35749 1972 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 CCDC169A6NNP5 214 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 TBKBP1A7MCY6 615 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 MEIS3P2A8K0S8 358 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 H3BNC9 293 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 K7ERI5 159 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 STAT6P42226 847 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 NCKAP1LP55160 1127 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 PRPF4BQ13523 1007 aaKnown RBP19.07■□□□□ 0.64
USB1-209ENST00000564387 DHX8Q14562 1220 aaKnown RBP19.07■□□□□ 0.64
USB1-209ENST00000564387 NT5DC1Q5TFE4 455 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 ADALQ6DHV7 355 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 LRRC55Q6ZSA7 311 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 SV2BQ7L1I2 683 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 DNAJC19Q96DA6 116 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 PGBD4Q96DM1 585 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 CUEDC2Q9H467 287 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 PDZD7Q9H5P4 517 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 KBTBD4Q9NVX7 518 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 LMCD1Q9NZU5 365 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 IPPQ9Y573 584 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 TCHHQ07283 1943 aa19.07■□□□□ 0.64
USB1-209ENST00000564387 MYMKA6NI61 221 aa19.06■□□□□ 0.64
USB1-209ENST00000564387 RFXAPO00287 272 aa19.06■□□□□ 0.64
USB1-209ENST00000564387 OFD1O75665 1012 aa19.06■□□□□ 0.64
USB1-209ENST00000564387 MAPTP10636 758 aaKnown RBP19.06■□□□□ 0.64
USB1-209ENST00000564387 FBXO22Q8NEZ5 403 aa19.06■□□□□ 0.64
USB1-209ENST00000564387 LPPQ93052 612 aa19.06■□□□□ 0.64
USB1-209ENST00000564387 P2RX5Q93086 422 aa19.06■□□□□ 0.64
USB1-209ENST00000564387 SPATA32Q96LK8 384 aa19.06■□□□□ 0.64
USB1-209ENST00000564387 GAS2L1Q99501 681 aaPredicted RBP19.06■□□□□ 0.64
USB1-209ENST00000564387 PANK2Q9BZ23 570 aa19.06■□□□□ 0.64
USB1-209ENST00000564387 PARVGQ9HBI0 331 aa19.06■□□□□ 0.64
USB1-209ENST00000564387 PTPRHQ9HD43 1115 aa19.06■□□□□ 0.64
USB1-209ENST00000564387 TYW1Q9NV66 732 aaKnown RBP19.06■□□□□ 0.64
USB1-209ENST00000564387 KIAA1671Q9BY89 1806 aa19.06■□□□□ 0.64
USB1-209ENST00000564387 ZMYM2Q9UBW7 1377 aa19.06■□□□□ 0.64
USB1-209ENST00000564387 REV3LO60673 3130 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 COL4A4P53420 1690 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms