RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ENAHQ8N8S7 591 aaPredicted RBP3.23□□□□□ -1.89
CHD9-209ENST00000564255 GPR156Q8NFN8 814 aa3.23□□□□□ -1.89
CHD9-209ENST00000564255 ZNF526Q8TF50 670 aaPredicted RBP3.23□□□□□ -1.89
CHD9-209ENST00000564255 DMRTA2Q96SC8 542 aa3.23□□□□□ -1.89
CHD9-209ENST00000564255 TMEM209Q96SK2 561 aa3.23□□□□□ -1.89
CHD9-209ENST00000564255 RBM12Q9NTZ6 932 aaKnown RBP3.23□□□□□ -1.89
CHD9-209ENST00000564255 FNIP2Q9P278 1114 aa3.23□□□□□ -1.89
CHD9-209ENST00000564255 PLA2G2DQ9UNK4 145 aa3.23□□□□□ -1.89
CHD9-209ENST00000564255 PCDHGB6Q9Y5F9 930 aa3.23□□□□□ -1.89
CHD9-209ENST00000564255 MYF5P13349 255 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 GSPT1P15170 499 aaKnown RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 SDHBP21912 280 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 SEPT2Q15019 361 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 POLD3Q15054 466 aaPredicted RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 DGKDQ16760 1214 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 ZNF792Q3KQV3 632 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 APOA5Q6Q788 366 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 TTC7BQ86TV6 843 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 GLB1L3Q8NCI6 653 aaPredicted RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 ATXN2LQ8WWM7 1075 aaKnown RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 RIN2Q8WYP3 895 aaPredicted RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 DPF2Q92785 391 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 RGMAQ96B86 450 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 ATP6V0A4Q9HBG4 840 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 PCDH18Q9HCL0 1135 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 DMRT3Q9NQL9 472 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 TRMT13Q9NUP7 481 aaKnown RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 PCDHB1Q9Y5F3 818 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 OR14I1A6ND48 311 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 RASA4BC9J798 803 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 RASA4O43374 803 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 PPFIA4O75335 1185 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 SETSIPP0DME0 302 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 HK3P52790 923 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 CD83Q01151 205 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 HSP90AB4PQ58FF6 505 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 C19orf54Q5BKX5 351 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 ADGRF1Q5T601 910 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 DPP8Q6V1X1 898 aaPredicted RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 MIGA2Q7L4E1 593 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 COL23A1Q86Y22 540 aaPredicted RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 GLB1L2Q8IW92 636 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 PLBD2Q8NHP8 589 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 DEPTORQ8TB45 409 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 PPM1EQ8WY54 764 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 PHKBQ93100 1093 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 C22orf23Q9BZE7 217 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 ZNF552Q9H707 407 aaPredicted RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 KCND1Q9NSA2 647 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 POLR3BQ9NW08 1133 aaPredicted RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 ANGEL1Q9UNK9 670 aaKnown RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 N4BP3O15049 544 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 ARIH2O95376 493 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 LTA4HP09960 611 aaKnown RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 NCAM1P13591 858 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 RPL17P18621 184 aaKnown RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 CASP5P51878 434 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 CHAF1AQ13111 956 aaPredicted RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 IFIT5Q13325 482 aaKnown RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 DGKKQ5KSL6 1271 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 DPP9Q86TI2 863 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 ZC3H18Q86VM9 953 aaKnown RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 DRC7Q8IY82 874 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.22□□□□□ -1.89
CHD9-209ENST00000564255 NKD2Q969F2 451 aaPredicted RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 KIRREL1Q96J84 757 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 ZC3H10Q96K80 434 aaKnown RBP3.22□□□□□ -1.89
CHD9-209ENST00000564255 TBCBQ99426 244 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 UBA5Q9GZZ9 404 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 ARHGAP20Q9P2F6 1191 aa3.22□□□□□ -1.89
CHD9-209ENST00000564255 MGEA5O60502 916 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 CTSSP25774 331 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 PEX2P28328 305 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 PIK3CBP42338 1070 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 SLC6A9P48067 706 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 BTKQ06187 659 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 NOGQ13253 232 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 FGL2Q14314 439 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 FYB2Q5VWT5 728 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 FAM180AQ6UWF9 173 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 CD300LDQ6UXZ3 194 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 TAS1R1Q7RTX1 841 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 DAAM2Q86T65 1068 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 C3orf20Q8ND61 904 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 ANKS1AQ92625 1134 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 CDK5RAP3Q96JB5 506 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 FAM167AQ96KS9 214 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 MRGPRX4Q96LA9 322 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 RIPOR3Q96MK2 946 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 HERPUD2Q9BSE4 406 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 PPCSQ9HAB8 311 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 DCP1AQ9NPI6 582 aaPredicted RBP3.21□□□□□ -1.9
CHD9-209ENST00000564255 CALCOCO1Q9P1Z2 691 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 SAE1Q9UBE0 346 aaPredicted RBP3.21□□□□□ -1.9
CHD9-209ENST00000564255 DMTF1Q9Y222 760 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 NR2E3Q9Y5X4 410 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 LY86O95711 162 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 FTLP02792 175 aaPredicted RBP3.21□□□□□ -1.9
CHD9-209ENST00000564255 CHGBP05060 677 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms