RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 DTHD1Q6ZMT9 781 aa13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 URGCPQ8TCY9 931 aa13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 CSRNP2Q9H175 543 aa13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 C2orf40Q9H1Z8 148 aa13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 RSAD1Q9HA92 442 aa13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 TBC1D13Q9NVG8 400 aa13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 PRKAG3Q9UGI9 489 aa13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 SLC26A4O43511 780 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 EYA4O95677 639 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 BMP15O95972 392 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 NAMPTP43490 491 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 BCAR1P56945 870 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 PPP2R5AQ15172 486 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 ECM1Q16610 540 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 KRT79Q5XKE5 535 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 LARP1BQ659C4 914 aaKnown RBP13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 TMEM184AQ6ZMB5 413 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 BRAPQ7Z569 592 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 ADGRD2Q7Z7M1 963 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 ZBTB8OSQ8IWT0 167 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 FAM178BQ8IXR5 827 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 HACE1Q8IYU2 909 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 SNX29Q8TEQ0 813 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 KIFAP3Q92845 792 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 LPPQ93052 612 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 MSLNLQ96KJ4 702 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 TMEM175Q9BSA9 504 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 FZD8Q9H461 694 aa13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 PRMT7Q9NVM4 692 aaPredicted RBP13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 FNDC1Q4ZHG4 1894 aaPredicted RBP13.54□□□□□ -0.24
NSMCE1-204ENST00000563273 BDP1A6H8Y1 2624 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 A0A087WWV3 80 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 A0A1B0GUA9 196 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 LRRIQ4A6NIV6 560 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 MEIS3P2A8K0S8 358 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 H3BQ06 376 aaPredicted RBP13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 TBX10O75333 385 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 GALTP07902 379 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 ARF4P18085 180 aaPredicted RBP13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 PDCP20941 246 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 NRIP1P48552 1158 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 ERVFC1P60507 584 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 COASYQ13057 564 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 SMAD4Q13485 552 aaKnown RBP13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 KCNC3Q14003 757 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 BMS1Q14692 1282 aaKnown RBP13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 IL17AQ16552 155 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 DUSP6Q16828 381 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 HYIQ5T013 277 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 SMG8Q8ND04 991 aaKnown RBP13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 MICAL1Q8TDZ2 1067 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 TMEM169Q96HH4 297 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 TCF25Q9BQ70 676 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 BHMT2Q9H2M3 363 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 NRDE2Q9H7Z3 1164 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 TLE6Q9H808 572 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 GPRC5CQ9NQ84 441 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 DDX19AQ9NUU7 478 aaKnown RBP13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 KIAA1024Q9UPX6 916 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 DNM3Q9UQ16 869 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 GIT1Q9Y2X7 761 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 IPPQ9Y573 584 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 IRAK3Q9Y616 596 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 BRWD1Q9NSI6 2320 aa13.53□□□□□ -0.24
NSMCE1-204ENST00000563273 ZC3H11AO75152 810 aaKnown RBP eCLIP13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 ITGA4P13612 1032 aa13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 GTF2F1P35269 517 aaKnown RBP eCLIP13.52□□□□□ -0.255e-6■■■■□ 22
NSMCE1-204ENST00000563273 EFNA5P52803 228 aa13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 RNASELQ05823 741 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 DLX2Q07687 328 aaPredicted RBP13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 GIT2Q14161 759 aa13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 SMC1AQ14683 1233 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 SMAD2Q15796 467 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 SLC27A1Q6PCB7 646 aa13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 DDX53Q86TM3 631 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 MRPL43Q8N983 215 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 INTS4Q96HW7 963 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 IGSF21Q96ID5 467 aa13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 AK8Q96MA6 479 aa13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 NECAB3Q96P71 396 aaPredicted RBP13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 MMTAG2Q9BU76 263 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 TIPINQ9BVW5 301 aa13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 EIF2AQ9BY44 585 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 NT5C3AQ9H0P0 336 aa13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 ENTPD7Q9NQZ7 604 aa13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 CLEC1BQ9P126 229 aa13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 CD207Q9UJ71 328 aa13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 PHLPP2Q6ZVD8 1323 aa13.52□□□□□ -0.25
NSMCE1-204ENST00000563273 NCOR1O75376 2440 aa13.51□□□□□ -0.25
NSMCE1-204ENST00000563273 ARID2Q68CP9 1835 aa13.51□□□□□ -0.25
NSMCE1-204ENST00000563273 ACKR2O00590 384 aa13.51□□□□□ -0.25
NSMCE1-204ENST00000563273 LINC01565O15544 149 aa13.51□□□□□ -0.25
NSMCE1-204ENST00000563273 MBTPS2O43462 519 aa13.51□□□□□ -0.25
NSMCE1-204ENST00000563273 GLP2RO95838 553 aa13.51□□□□□ -0.25
NSMCE1-204ENST00000563273 SRGAP2BP0DMP2 458 aa13.51□□□□□ -0.25
NSMCE1-204ENST00000563273 IL9P15248 144 aa13.51□□□□□ -0.25
NSMCE1-204ENST00000563273 PBX3P40426 434 aa13.51□□□□□ -0.25
NSMCE1-204ENST00000563273 NDUFV1P49821 464 aa13.51□□□□□ -0.25
NSMCE1-204ENST00000563273 MAPK6Q16659 721 aa13.51□□□□□ -0.25
NSMCE1-204ENST00000563273 EP400NLQ6ZTU2 488 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms