RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 C8AP07357 584 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 DBHP09172 617 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 CCL5P13501 91 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 TMPOP42166 694 aaKnown RBP6.92□□□□□ -1.3
UBR1-203ENST00000562173 CBX2Q14781 532 aaPredicted RBP6.92□□□□□ -1.3
UBR1-203ENST00000562173 HSP90AB3PQ58FF7 597 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 TAF7LQ5H9L4 462 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 ADGRF1Q5T601 910 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 BICRALQ6AI39 1079 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 TTLL5Q6EMB2 1281 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 PAQR3Q6TCH7 311 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 TSPYL6Q8N831 410 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 TTLL11Q8NHH1 800 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 PLEKHO2Q8TD55 490 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 PNISRQ8TF01 805 aaKnown RBP6.92□□□□□ -1.3
UBR1-203ENST00000562173 ZKSCAN4Q969J2 545 aaPredicted RBP6.92□□□□□ -1.3
UBR1-203ENST00000562173 TMEM169Q96HH4 297 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 FEZ1Q99689 392 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 MARCH2Q9P0N8 246 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 NUDT5Q9UKK9 219 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 NUDCQ9Y266 331 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 COA3Q9Y2R0 106 aaPredicted RBP6.92□□□□□ -1.3
UBR1-203ENST00000562173 RWDD3Q9Y3V2 267 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 ESYT3A0FGR9 886 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 WNT9AO14904 365 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 RFPL3O75679 317 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 CTSWP56202 376 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 YBX1P67809 324 aaKnown RBP6.91□□□□□ -1.3
UBR1-203ENST00000562173 PRKCZQ05513 592 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 PLEKHG4Q58EX7 1191 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 EPHA10Q5JZY3 1008 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 GIMAP6Q6P9H5 292 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 ANKRD18AQ8IVF6 992 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 C8orf58Q8NAV2 365 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 PANK1Q8TE04 598 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 PEX11GQ96HA9 241 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 EPB41L4BQ9H329 900 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 EPB41L1Q9H4G0 881 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 CD209Q9NNX6 404 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 FANCLQ9NW38 375 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 PLAAQ9Y263 795 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 PCDHA2Q9Y5H9 948 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 CDH23Q9H251 3354 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 ATAD5Q96QE3 1844 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 ADGRA2Q96PE1 1338 aa6.91□□□□□ -1.3
UBR1-203ENST00000562173 LTBP2Q14767 1821 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 DOCK2Q92608 1830 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 CHL1O00533 1208 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 PLIN1O60240 522 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 PDE8AO60658 829 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 CYP2C8P10632 490 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 LCP1P13796 627 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 GRK2P25098 689 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 NF2P35240 595 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 GRK3P35626 688 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 BCL6P41182 706 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 MAPKAPK2P49137 400 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 LACTBP83111 547 aaPredicted RBP6.9□□□□□ -1.3
UBR1-203ENST00000562173 CHRNDQ07001 517 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 MOGSQ13724 837 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 DLGAP5Q15398 846 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 STRIP1Q5VSL9 837 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 SDE2Q6IQ49 451 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 KIAA0907Q7Z7F0 614 aaPredicted RBP6.9□□□□□ -1.3
UBR1-203ENST00000562173 APOBEC3FQ8IUX4 373 aaKnown RBP6.9□□□□□ -1.3
UBR1-203ENST00000562173 DEFB123Q8N688 67 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 TRMT2BQ96GJ1 504 aaKnown RBP6.9□□□□□ -1.3
UBR1-203ENST00000562173 GUCD1Q96NT3 240 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 KANSL2Q9H9L4 492 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 ZNF70Q9UC06 446 aaPredicted RBP6.9□□□□□ -1.3
UBR1-203ENST00000562173 MAP3K2Q9Y2U5 619 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 ZNF804BA4D1E1 1349 aa6.9□□□□□ -1.3
UBR1-203ENST00000562173 BLACEA4D250 179 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 C22orf46C9J442 243 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 ARVCFO00192 962 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 SEMA7AO75326 666 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 FARP2O94887 1054 aaPredicted RBP6.89□□□□□ -1.31
UBR1-203ENST00000562173 PCCAP05165 728 aaPredicted RBP6.89□□□□□ -1.31
UBR1-203ENST00000562173 ZBTB48P10074 688 aaPredicted RBP6.89□□□□□ -1.31
UBR1-203ENST00000562173 TACR1P25103 407 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 HSD3B2P26439 372 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 PSMC4P43686 418 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 RBM5P52756 815 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBR1-203ENST00000562173 SLC9A5Q14940 896 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 KIR3DS1Q14943 382 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 PLEKHN1Q494U1 663 aaPredicted RBP6.89□□□□□ -1.31
UBR1-203ENST00000562173 EMC4Q5J8M3 183 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 ZNF648Q5T619 568 aaPredicted RBP6.89□□□□□ -1.31
UBR1-203ENST00000562173 KCNT2Q6UVM3 1135 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 MIGA2Q7L4E1 593 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 UBE3BQ7Z3V4 1068 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 MTDHQ86UE4 582 aaKnown RBP6.89□□□□□ -1.31
UBR1-203ENST00000562173 TEX2Q8IWB9 1127 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.89□□□□□ -1.31
UBR1-203ENST00000562173 USP33Q8TEY7 942 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 U2AF1L4Q8WU68 220 aaKnown RBP6.89□□□□□ -1.31
UBR1-203ENST00000562173 TSPAN17Q96FV3 270 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 LIN37Q96GY3 246 aaPredicted RBP6.89□□□□□ -1.31
UBR1-203ENST00000562173 AP5M1Q9H0R1 490 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 CDIP1Q9H305 208 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms