RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CNGA1P29973 690 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 NOP2P46087 812 aaKnown RBP10.64□□□□□ -0.71
SMG1-205ENST00000561947 SNRNP35Q16560 246 aaKnown RBP10.64□□□□□ -0.71
SMG1-205ENST00000561947 CFAP221Q4G0U5 840 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 GADL1Q6ZQY3 521 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 CBWD2Q8IUF1 395 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 ARHGEF19Q8IW93 802 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 MSL3Q8N5Y2 521 aaKnown RBP10.64□□□□□ -0.71
SMG1-205ENST00000561947 TMEM117Q9H0C3 514 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 USP20Q9Y2K6 914 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 SIP14410 1827 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 FOXN3O00409 490 aaPredicted RBP10.64□□□□□ -0.71
SMG1-205ENST00000561947 PEX10O60683 326 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 ATG7O95352 703 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 IREB2P48200 963 aaKnown RBP10.64□□□□□ -0.71
SMG1-205ENST00000561947 FSTL1Q12841 308 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 SMC1AQ14683 1233 aaKnown RBP10.64□□□□□ -0.71
SMG1-205ENST00000561947 MAP9Q49MG5 647 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 SLC39A4Q6P5W5 647 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 CYFIP1Q7L576 1253 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 GLYCTKQ8IVS8 523 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 LRRC57Q8N9N7 239 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 TPCN2Q8NHX9 752 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 RUBCNQ92622 972 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 SAAL1Q96ER3 474 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 POLR3FQ9H1D9 316 aaPredicted RBP10.64□□□□□ -0.71
SMG1-205ENST00000561947 SUGCTQ9HAC7 445 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 UBE2TQ9NPD8 197 aaPredicted RBP10.64□□□□□ -0.71
SMG1-205ENST00000561947 PACSIN2Q9UNF0 486 aaPredicted RBP10.64□□□□□ -0.71
SMG1-205ENST00000561947 NCANO14594 1321 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 SYNGAP1Q96PV0 1343 aa10.64□□□□□ -0.71
SMG1-205ENST00000561947 A0A0G2JLL6 359 aaPredicted RBP10.63□□□□□ -0.71
SMG1-205ENST00000561947 LRRN2O75325 713 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 GALCP54803 685 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 MTERF2Q49AM1 385 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 PRRT2Q7Z6L0 340 aaPredicted RBP10.63□□□□□ -0.71
SMG1-205ENST00000561947 PROCA1Q8NCQ7 364 aaPredicted RBP10.63□□□□□ -0.71
SMG1-205ENST00000561947 MS4A14Q96JA4 679 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 IFT74Q96LB3 600 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 FBXL18Q96ME1 805 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 ELP3Q9H9T3 547 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 ZNF302Q9NR11 478 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 RNF181Q9P0P0 153 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 MAFBQ9Y5Q3 323 aaPredicted RBP10.63□□□□□ -0.71
SMG1-205ENST00000561947 H0YCG3 227 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 CES2O00748 559 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 KIF4AO95239 1232 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 TMEM253P0C7T8 217 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 ATP4AP20648 1035 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 TNFAIP3P21580 790 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 ABCD1P33897 745 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 DNA2P51530 1060 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 PPATQ06203 517 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 CASP8Q14790 479 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 EMC2Q15006 297 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 RPS6KA1Q15418 735 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 SEPT14Q6ZU15 432 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 TMC2Q8TDI7 906 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 ZNF526Q8TF50 670 aaPredicted RBP10.63□□□□□ -0.71
SMG1-205ENST00000561947 LMBR1Q8WVP7 490 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 TAF4BQ92750 862 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 MFSD14AQ96MC6 490 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 AGPAT1Q99943 283 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 LRRC1Q9BTT6 524 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 SPATC1LQ9H0A9 340 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 ARHGAP28Q9P2N2 729 aa10.63□□□□□ -0.71
SMG1-205ENST00000561947 LRRIQ3A6PVS8 624 aaPredicted RBP10.62□□□□□ -0.71
SMG1-205ENST00000561947 IRF6O14896 467 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 OATP04181 439 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 GARTP22102 1010 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 EDNRBP24530 442 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 OAS2P29728 719 aaKnown RBP10.62□□□□□ -0.71
SMG1-205ENST00000561947 MATR3P43243 847 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMG1-205ENST00000561947 IRX3P78415 501 aaPredicted RBP10.62□□□□□ -0.71
SMG1-205ENST00000561947 BRDTQ58F21 947 aaPredicted RBP10.62□□□□□ -0.71
SMG1-205ENST00000561947 KRT39Q6A163 491 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 CCNI2Q6ZMN8 369 aaPredicted RBP10.62□□□□□ -0.71
SMG1-205ENST00000561947 SLFN11Q7Z7L1 901 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 NCAPG2Q86XI2 1143 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 PARD3BQ8TEW8 1205 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 POMGNT1Q8WZA1 660 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 UPF1Q92900 1129 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMG1-205ENST00000561947 SPON1Q9HCB6 807 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 TMEM8AQ9HCN3 771 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 RBM12Q9NTZ6 932 aaKnown RBP10.62□□□□□ -0.71
SMG1-205ENST00000561947 KCNG1Q9UIX4 513 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 SOWAHBA6NEL2 793 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 HNRNPDLO14979 420 aaKnown RBP10.62□□□□□ -0.71
SMG1-205ENST00000561947 ZMYND10O75800 440 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 UBA1P22314 1058 aaKnown RBP10.62□□□□□ -0.71
SMG1-205ENST00000561947 POLGP54098 1239 aaPredicted RBP10.62□□□□□ -0.71
SMG1-205ENST00000561947 MAP2K1Q02750 393 aaPredicted RBP10.62□□□□□ -0.71
SMG1-205ENST00000561947 ENPEPQ07075 957 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 CYP24A1Q07973 514 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 TAS1R3Q7RTX0 852 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 SYCE1Q8N0S2 351 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 GPD1LQ8N335 351 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 CCDC127Q96BQ5 260 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 OTUD5Q96G74 571 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 PBKQ96KB5 322 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms