RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 RSAD1Q9HA92 442 aa26.08■■□□□ 1.77
TMEM170A-202ENST00000561878 KANSL3Q9P2N6 904 aa26.08■■□□□ 1.77
TMEM170A-202ENST00000561878 USP15Q9Y4E8 981 aaPredicted RBP26.08■■□□□ 1.77
TMEM170A-202ENST00000561878 FAM86C2PA6NEL3 165 aa26.07■■□□□ 1.76
TMEM170A-202ENST00000561878 INO80B-WBP1J3KQ70 363 aa26.07■■□□□ 1.76
TMEM170A-202ENST00000561878 OR52Z1P0C646 297 aa26.07■■□□□ 1.76
TMEM170A-202ENST00000561878 CA8P35219 290 aa26.07■■□□□ 1.76
TMEM170A-202ENST00000561878 NOTUMQ6P988 496 aa26.07■■□□□ 1.76
TMEM170A-202ENST00000561878 AGMOQ6ZNB7 445 aa26.07■■□□□ 1.76
TMEM170A-202ENST00000561878 IFNLR1Q8IU57 520 aaPredicted RBP26.07■■□□□ 1.76
TMEM170A-202ENST00000561878 MRPL43Q8N983 215 aaKnown RBP26.07■■□□□ 1.76
TMEM170A-202ENST00000561878 ERMNQ8TAM6 284 aa26.07■■□□□ 1.76
TMEM170A-202ENST00000561878 KIF2CQ99661 725 aa26.07■■□□□ 1.76
TMEM170A-202ENST00000561878 UBN1Q9NPG3 1134 aa26.07■■□□□ 1.76
TMEM170A-202ENST00000561878 C11orf16Q9NQ32 467 aa26.07■■□□□ 1.76
TMEM170A-202ENST00000561878 NCLP19338 710 aaKnown RBP26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 ARL2P36404 184 aa26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 TECP42680 631 aa26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 RBM10P98175 930 aaKnown RBP26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 CAPSQ13938 189 aa26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 KCNC3Q14003 757 aa26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 UBXN11Q5T124 520 aa26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 ANKRD54Q6NXT1 300 aa26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 CASP10Q92851 521 aa26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 IGSF21Q96ID5 467 aa26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 FAM193BQ96PV7 902 aaPredicted RBP26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 NFKBIZQ9BYH8 718 aa26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 GBP3Q9H0R5 595 aa26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 STK39Q9UEW8 545 aa26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 NOL7Q9UMY1 257 aaKnown RBP26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 HCN4Q9Y3Q4 1203 aa26.06■■□□□ 1.76
TMEM170A-202ENST00000561878 C2orf71A6NGG8 1288 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 PRR33A8MZF0 331 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 TSPAN1O60635 241 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 USO1O60763 962 aaKnown RBP26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 GALTP07902 379 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 HOXB8P17481 243 aaPredicted RBP26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 TRAPPC10P48553 1259 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 GIT2Q14161 759 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 ZNF174Q15697 407 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 TTC38Q5R3I4 469 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 LLGL2Q6P1M3 1020 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 DDX53Q86TM3 631 aaKnown RBP26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 NOSTRINQ8IVI9 506 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 VPS52Q8N1B4 723 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 TMEM87AQ8NBN3 555 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 ASAP3Q8TDY4 903 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 POLR3CQ9BUI4 534 aaPredicted RBP26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 POLR3FQ9H1D9 316 aaPredicted RBP26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 RAPGEFL1Q9UHV5 662 aa26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 DBR1Q9UK59 544 aaKnown RBP26.05■■□□□ 1.76
TMEM170A-202ENST00000561878 CXCL14O95715 111 aa26.04■■□□□ 1.76
TMEM170A-202ENST00000561878 SPATA31C1P0DKV0 1188 aa26.04■■□□□ 1.76
TMEM170A-202ENST00000561878 ITGA4P13612 1032 aa26.04■■□□□ 1.76
TMEM170A-202ENST00000561878 GLRA2P23416 452 aa26.04■■□□□ 1.76
TMEM170A-202ENST00000561878 CATSPER3Q86XQ3 398 aa26.04■■□□□ 1.76
TMEM170A-202ENST00000561878 HACE1Q8IYU2 909 aa26.04■■□□□ 1.76
TMEM170A-202ENST00000561878 MCPH1Q8NEM0 835 aa26.04■■□□□ 1.76
TMEM170A-202ENST00000561878 NACC1Q96RE7 527 aa26.04■■□□□ 1.76
TMEM170A-202ENST00000561878 PHF7Q9BWX1 381 aaPredicted RBP26.04■■□□□ 1.76
TMEM170A-202ENST00000561878 ZBP1Q9H171 429 aa26.04■■□□□ 1.76
TMEM170A-202ENST00000561878 CSRNP2Q9H175 543 aa26.04■■□□□ 1.76
TMEM170A-202ENST00000561878 MED24O75448 989 aa26.03■■□□□ 1.76
TMEM170A-202ENST00000561878 MBTD1Q05BQ5 628 aa26.03■■□□□ 1.76
TMEM170A-202ENST00000561878 TMEM173Q86WV6 379 aaPredicted RBP26.03■■□□□ 1.76
TMEM170A-202ENST00000561878 RNF135Q8IUD6 432 aa26.03■■□□□ 1.76
TMEM170A-202ENST00000561878 SUSD6Q92537 303 aa26.03■■□□□ 1.76
TMEM170A-202ENST00000561878 TMEM175Q9BSA9 504 aa26.03■■□□□ 1.76
TMEM170A-202ENST00000561878 TRIM6Q9C030 488 aaPredicted RBP26.03■■□□□ 1.76
TMEM170A-202ENST00000561878 DNAJB4Q9UDY4 337 aa26.03■■□□□ 1.76
TMEM170A-202ENST00000561878 KIF3AQ9Y496 699 aa26.03■■□□□ 1.76
TMEM170A-202ENST00000561878 IPPQ9Y573 584 aa26.03■■□□□ 1.76
TMEM170A-202ENST00000561878 C5orf42Q9H799 3197 aa26.02■■□□□ 1.76
TMEM170A-202ENST00000561878 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.02■■□□□ 1.76
TMEM170A-202ENST00000561878 CTSAP10619 480 aa26.02■■□□□ 1.76
TMEM170A-202ENST00000561878 RPA1P27694 616 aa26.02■■□□□ 1.76
TMEM170A-202ENST00000561878 SLC11A1P49279 550 aa26.02■■□□□ 1.76
TMEM170A-202ENST00000561878 RABEP1Q15276 862 aa26.02■■□□□ 1.76
TMEM170A-202ENST00000561878 TPRNQ4KMQ1 711 aa26.02■■□□□ 1.76
TMEM170A-202ENST00000561878 HAUS3Q68CZ6 603 aa26.02■■□□□ 1.76
TMEM170A-202ENST00000561878 ZNF280BQ86YH2 543 aa26.02■■□□□ 1.76
TMEM170A-202ENST00000561878 CPB2Q96IY4 423 aa26.02■■□□□ 1.76
TMEM170A-202ENST00000561878 HCFC2Q9Y5Z7 792 aa26.02■■□□□ 1.76
TMEM170A-202ENST00000561878 IRAK3Q9Y616 596 aa26.02■■□□□ 1.76
TMEM170A-202ENST00000561878 A0A087WWV3 80 aa26.01■■□□□ 1.75
TMEM170A-202ENST00000561878 LOC730098B7Z3J9 87 aa26.01■■□□□ 1.75
TMEM170A-202ENST00000561878 ST18O60284 1047 aa26.01■■□□□ 1.75
TMEM170A-202ENST00000561878 ALDH2P05091 517 aa26.01■■□□□ 1.75
TMEM170A-202ENST00000561878 MUTP22033 750 aa26.01■■□□□ 1.75
TMEM170A-202ENST00000561878 HERC4Q5GLZ8 1057 aaPredicted RBP26.01■■□□□ 1.75
TMEM170A-202ENST00000561878 SMG8Q8ND04 991 aaKnown RBP26.01■■□□□ 1.75
TMEM170A-202ENST00000561878 EIF2AQ9BY44 585 aaKnown RBP26.01■■□□□ 1.75
TMEM170A-202ENST00000561878 LRRIQ4A6NIV6 560 aa26■■□□□ 1.75
TMEM170A-202ENST00000561878 CLASP2O75122 1294 aaKnown RBP26■■□□□ 1.75
TMEM170A-202ENST00000561878 DDHD2O94830 711 aa26■■□□□ 1.75
TMEM170A-202ENST00000561878 POMCP01189 267 aa26■■□□□ 1.75
TMEM170A-202ENST00000561878 ARF4P18085 180 aaPredicted RBP26■■□□□ 1.75
TMEM170A-202ENST00000561878 CBX2Q14781 532 aaPredicted RBP26■■□□□ 1.75
TMEM170A-202ENST00000561878 SYCE2Q6PIF2 218 aa26■■□□□ 1.75
TMEM170A-202ENST00000561878 POTEGQ6S5H5 508 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms