RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 GPR153Q6NV75 609 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 DYMQ7RTS9 669 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 HERC6Q8IVU3 1022 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 FMR1NBQ8N0W7 255 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 FSIP1Q8NA03 581 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 TMEM161BQ8NDZ6 487 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 DEPTORQ8TB45 409 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 CCDC51Q96ER9 411 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 STRA6Q9BX79 667 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 TRIM9Q9C026 710 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 OLFML3Q9NRN5 406 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 SERTAD1Q9UHV2 236 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 PCDHA11Q9Y5I1 949 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 CNTNAP2Q9UHC6 1331 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 A0A0C4DFX4 3053 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 PVALEFA0A1B0GWK0 134 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 DENND3A2RUS2 1198 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 GOLGA6L4A6NEF3 574 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 CCDC169A6NNP5 214 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 ERLIN2O94905 339 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 FAM13AO94988 1023 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 ZNF202O95125 648 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 EOMESO95936 686 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 KRT18P05783 430 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 STAG3L1P0CL83 205 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 SKIP12755 728 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 ARF4P18085 180 aaPredicted RBP10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 RAB27AP51159 221 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 GTF2BQ00403 316 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 CACNB1Q02641 598 aaPredicted RBP10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 EHHADHQ08426 723 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 NCBP1Q09161 790 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 SNW1Q13573 536 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 UBXN11Q5T124 520 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 KANK3Q6NY19 840 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 NOTUMQ6P988 496 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 TAS1R3Q7RTX0 852 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 HAUS6Q7Z4H7 955 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 MRPL10Q7Z7H8 261 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 ZNF598Q86UK7 904 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 NPAS4Q8IUM7 802 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 ELOA2Q8IYF1 753 aaPredicted RBP10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 CEP57L1Q8IYX8 460 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 MYCT1Q8N699 235 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 RSPH1Q8WYR4 309 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 ZNF689Q96CS4 500 aaPredicted RBP10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 HVCN1Q96D96 273 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 TIGD1Q96MW7 591 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 RAD9AQ99638 391 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 GOLPH3LQ9H4A5 285 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 RC3H2Q9HBD1 1191 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 TMEM161AQ9NX61 479 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 PIN4Q9Y237 131 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 INSL6Q9Y581 213 aa10.61□□□□□ -0.71
RABGGTA-221ENST00000561055 TMEM265A0A087WTH1 108 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 RBAK-RBAKDNI3L0D1 243 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 SLC16A4O15374 487 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 TBCAO75347 108 aaKnown RBP10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 PPP1R37O75864 691 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 DGKIO75912 1065 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 PRKCBP05771 671 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 ATF7P17544 494 aaPredicted RBP10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 FAM160A1Q05DH4 1040 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 PRPF4BQ13523 1007 aaKnown RBP10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 RAB30Q15771 203 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 FAM109BQ6ICB4 259 aaPredicted RBP10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 KRBA2Q6ZNG9 492 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 ZNF720Q7Z2F6 126 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 ECHDC2Q86YB7 292 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 FAM178BQ8IXR5 827 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 CCDC65Q8IXS2 484 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 MYOCDQ8IZQ8 938 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 CNNM3Q8NE01 707 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 SP7Q8TDD2 431 aaPredicted RBP10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 STAMQ92783 540 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 PAGE5Q96GU1 130 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 KIFC3Q9BVG8 833 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 PBX4Q9BYU1 374 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 PTPRHQ9HD43 1115 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 FAM105AQ9NUU6 356 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 PANK4Q9NVE7 773 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 TNFSF13BQ9Y275 285 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 ATG2AQ2TAZ0 1938 aa10.6□□□□□ -0.71
RABGGTA-221ENST00000561055 PLXNA4Q9HCM2 1894 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 TTLL13PA6NNM8 815 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 GRXCR1A8MXD5 290 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 N4BP3O15049 544 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 B4GALT5O43286 388 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 GTPBP6O43824 516 aaPredicted RBP10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 KLRC4O43908 158 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 PIGRP01833 764 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 EDN1P05305 212 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 PROZP22891 400 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 FXR1P51114 621 aaKnown RBP eCLIP10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 UBE2HP62256 183 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 ALCAMQ13740 583 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 NT5DC1Q5TFE4 455 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 TWF2Q6IBS0 349 aaKnown RBP10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 SLC27A1Q6PCB7 646 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 ZPBP2Q6X784 338 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms