RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 HSP90B1P14625 803 aaKnown RBP4.82□□□□□ -1.64
HERC1-211ENST00000560983 POU3F3P20264 500 aaPredicted RBP4.82□□□□□ -1.64
HERC1-211ENST00000560983 SLURP1P55000 103 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 TLE2Q04725 743 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 EFEMP1Q12805 493 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 CC2D1BQ5T0F9 858 aaKnown RBP4.82□□□□□ -1.64
HERC1-211ENST00000560983 TREML2Q5T2D2 321 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 FKBP1CQ5VVH2 108 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 EEF1DP3Q658K8 133 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 APOBEC3HQ6NTF7 200 aaKnown RBP4.82□□□□□ -1.64
HERC1-211ENST00000560983 FAM83AQ86UY5 434 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 JAMLQ86YT9 394 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 ZNF513Q8N8E2 541 aaPredicted RBP4.82□□□□□ -1.64
HERC1-211ENST00000560983 PRSS33Q8NF86 280 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 KLHL6Q8WZ60 621 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 LPAR1Q92633 364 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 SPATA32Q96LK8 384 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 ANKRD2Q9GZV1 360 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 GINM1Q9NU53 330 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 CHPF2Q9P2E5 772 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 SUSD2Q9UGT4 822 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 SLC12A7Q9Y666 1083 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 OTOFQ9HC10 1997 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 A0A1W2PQH9 124 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 TAF5LO75529 589 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 PRR5P85299 388 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 FOXO4P98177 505 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 PAK2Q13177 524 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 GRB10Q13322 594 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 TCEAL1Q15170 157 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 KRT24Q2M2I5 525 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 TMEM240Q5SV17 173 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 GJC2Q5T442 439 aaPredicted RBP4.81□□□□□ -1.64
HERC1-211ENST00000560983 BICRALQ6AI39 1079 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 LIPIQ6XZB0 460 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 GADL1Q6ZQY3 521 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 ARHGEF39Q8N4T4 335 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 NETO2Q8NC67 525 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 OR6P1Q8NGX9 317 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.81□□□□□ -1.64
HERC1-211ENST00000560983 MTA3Q9BTC8 594 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 PHAXQ9H814 394 aaKnown RBP4.81□□□□□ -1.64
HERC1-211ENST00000560983 FLRT1Q9NZU1 646 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 FBLN5Q9UBX5 448 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 DDX20Q9UHI6 824 aaKnown RBP4.81□□□□□ -1.64
HERC1-211ENST00000560983 TSPYL4Q9UJ04 414 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 COG5Q9UP83 839 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 AGTPBP1Q9UPW5 1226 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 MTCH2Q9Y6C9 303 aa4.81□□□□□ -1.64
HERC1-211ENST00000560983 A0A1W2PQ27 194 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 A0A1W2PQ64 194 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 A0A1W2PQC6 194 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 A0A1W2PQD8 194 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 PPP1R11O60927 126 aaPredicted RBP4.8□□□□□ -1.64
HERC1-211ENST00000560983 ASGR2P07307 311 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 CELA3BP08861 270 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 NCAM1P13591 858 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 ALADP13716 330 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 ZKSCAN1P17029 563 aaPredicted RBP4.8□□□□□ -1.64
HERC1-211ENST00000560983 GCLCP48506 637 aaPredicted RBP4.8□□□□□ -1.64
HERC1-211ENST00000560983 FPGSQ05932 587 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 CHRNDQ07001 517 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 TCF15Q12870 199 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 TRIM26Q12899 539 aaPredicted RBP4.8□□□□□ -1.64
HERC1-211ENST00000560983 MFSD14BQ5SR56 506 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 KRT40Q6A162 431 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 CCDC129Q6ZRS4 1044 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 B3GNT8Q7Z7M8 397 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 FAM178BQ8IXR5 827 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 ZNF654Q8IZM8 581 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 CCDC191Q8NCU4 936 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 TRPV1Q8NER1 839 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 TDRD7Q8NHU6 1098 aaKnown RBP4.8□□□□□ -1.64
HERC1-211ENST00000560983 CPA5Q8WXQ8 436 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 HOOK2Q96ED9 719 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 RCC1LQ96I51 464 aaKnown RBP4.8□□□□□ -1.64
HERC1-211ENST00000560983 ZDHHC15Q96MV8 337 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 MRIQ9BWK5 157 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 ADAM7Q9H2U9 754 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 NKX2-4Q9H2Z4 354 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 ALG13Q9NP73 1137 aaKnown RBP4.8□□□□□ -1.64
HERC1-211ENST00000560983 MORF4L1Q9UBU8 362 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 CNOT11Q9UKZ1 510 aaKnown RBP4.8□□□□□ -1.64
HERC1-211ENST00000560983 CHD8Q9HCK8 2581 aa4.8□□□□□ -1.64
HERC1-211ENST00000560983 TCF20Q9UGU0 1960 aaKnown RBP4.8□□□□□ -1.64
HERC1-211ENST00000560983 PKD1L2Q7Z442 2459 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 SCAMP3O14828 347 aaKnown RBP4.79□□□□□ -1.64
HERC1-211ENST00000560983 EPHX1P07099 455 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 CLTBP09497 229 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 TACR1P25103 407 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 ADCYAP1R1P41586 468 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 KCNJ4P48050 445 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 KCNC1P48547 511 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 CASP7P55210 303 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 HDLBPQ00341 1268 aaKnown RBP4.79□□□□□ -1.64
HERC1-211ENST00000560983 FBXW10Q5XX13 1052 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 CCDC81Q6ZN84 652 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 ZFPM1Q8IX07 1006 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 SCYL3Q8IZE3 742 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 ZDHHC14Q8IZN3 488 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms