RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 GNAI1P63096 354 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 SEC23AQ15436 765 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 SEPT7Q16181 437 aaKnown RBP5.38□□□□□ -1.55
TMOD3-207ENST00000560549 SKIDA1Q1XH10 827 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 MTHFSDQ2M296 383 aaKnown RBP5.38□□□□□ -1.55
TMOD3-207ENST00000560549 TAF7LQ5H9L4 462 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 PRAMEF18Q5VWM3 479 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 ATF7IPQ6VMQ6 1270 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 DBX2Q6ZNG2 339 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 ARHGAP36Q6ZRI8 547 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 TMEM57Q8N5G2 664 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 UBR7Q8N806 425 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 TMEM209Q96SK2 561 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 ORAI2Q96SN7 254 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 DLL4Q9NR61 685 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 INTS7Q9NVH2 962 aaKnown RBP5.38□□□□□ -1.55
TMOD3-207ENST00000560549 MIS18AQ9NYP9 233 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 G3BP2Q9UN86 482 aaKnown RBP5.38□□□□□ -1.55
TMOD3-207ENST00000560549 COQ6Q9Y2Z9 468 aa5.38□□□□□ -1.55
TMOD3-207ENST00000560549 MAP2P11137 1827 aaKnown RBP5.37□□□□□ -1.55
TMOD3-207ENST00000560549 ITSN1Q15811 1721 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 NHSL1Q5SYE7 1610 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 RGPD8O14715 1765 aaPredicted RBP5.37□□□□□ -1.55
TMOD3-207ENST00000560549 SBNO1A3KN83 1393 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 CCDC66A2RUB6 948 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 MROH6A6NGR9 719 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 C9orf118A6NHY6 69 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 ZNF839A8K0R7 811 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 CHL1O00533 1208 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 KLHL18O94889 574 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 POU3F2P20265 443 aaPredicted RBP5.37□□□□□ -1.55
TMOD3-207ENST00000560549 AMPHP49418 695 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 TBX4P57082 545 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 PFKPQ01813 784 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 ALDH1L2Q3SY69 923 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 VASNQ6EMK4 673 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 HHIPL2Q6UWX4 724 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 STRA8Q7Z7C7 330 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 CISD2Q8N5K1 135 aaKnown RBP5.37□□□□□ -1.55
TMOD3-207ENST00000560549 NUDT10Q8NFP7 164 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 FBXW5Q969U6 566 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 NUDT11Q96G61 164 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 CLIC6Q96NY7 704 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 ANP32EQ9BTT0 268 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 SSBP3Q9BWW4 388 aaPredicted RBP5.37□□□□□ -1.55
TMOD3-207ENST00000560549 SLC39A2Q9NP94 309 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 KCND1Q9NSA2 647 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 GEMIN8Q9NWZ8 242 aaKnown RBP5.37□□□□□ -1.55
TMOD3-207ENST00000560549 ZFP69BQ9UJL9 534 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 INVSQ9Y283 1065 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 CRB1P82279 1406 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 IGSF1Q8N6C5 1336 aa5.37□□□□□ -1.55
TMOD3-207ENST00000560549 COL16A1Q07092 1604 aaPredicted RBP5.36□□□□□ -1.55
TMOD3-207ENST00000560549 PIK3C2AO00443 1686 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 ARHGEF10O15013 1369 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 FLT4P35916 1363 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 UTRNP46939 3433 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 EFCAB14O75071 495 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 PTPN1P18031 435 aaKnown RBP5.36□□□□□ -1.55
TMOD3-207ENST00000560549 KRT15P19012 456 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 GLRBP48167 497 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 CDKN1CP49918 316 aaPredicted RBP5.36□□□□□ -1.55
TMOD3-207ENST00000560549 PCBP1Q15365 356 aaKnown RBP eCLIP5.36□□□□□ -1.555e-10■□□□□ 10.1
TMOD3-207ENST00000560549 GPR19Q15760 415 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 TWISTNBQ3B726 338 aaPredicted RBP5.36□□□□□ -1.55
TMOD3-207ENST00000560549 TBC1D10BQ4KMP7 808 aaPredicted RBP5.36□□□□□ -1.55
TMOD3-207ENST00000560549 CNNM4Q6P4Q7 775 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 C16orf59Q7L2K0 433 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 FMNL3Q8IVF7 1028 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 NOSTRINQ8IVI9 506 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 ITPRIPQ8IWB1 547 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 CCAR1Q8IX12 1150 aaKnown RBP5.36□□□□□ -1.55
TMOD3-207ENST00000560549 AFAP1L2Q8N4X5 818 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 LTV1Q96GA3 475 aaPredicted RBP5.36□□□□□ -1.55
TMOD3-207ENST00000560549 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 CATSPERZQ9NTU4 200 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 ZBTB40Q9NUA8 1239 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 KIF1AQ12756 1690 aa5.36□□□□□ -1.55
TMOD3-207ENST00000560549 RGPD1P0DJD0 1748 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 K7ESM1 405 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 PLATP00750 562 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 KNG1P01042 644 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 MC4RP32245 332 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 DNM2P50570 870 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 CALD1Q05682 793 aaKnown RBP5.35□□□□□ -1.55
TMOD3-207ENST00000560549 LMOD3Q0VAK6 560 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 KIAA2012Q0VF49 1180 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 DBPQ10586 325 aaPredicted RBP5.35□□□□□ -1.55
TMOD3-207ENST00000560549 CPZQ66K79 652 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 PKN3Q6P5Z2 889 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 TRMT10BQ6PF06 316 aaKnown RBP5.35□□□□□ -1.55
TMOD3-207ENST00000560549 GGNQ86UU5 652 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 FTSJ3Q8IY81 847 aaKnown RBP5.35□□□□□ -1.55
TMOD3-207ENST00000560549 STPG3Q8N7X2 389 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 MAPRE3Q9UPY8 281 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 NPHP3Q7Z494 1330 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 KDRP35968 1356 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 JCADQ9P266 1359 aa5.35□□□□□ -1.55
TMOD3-207ENST00000560549 IPO8O15397 1037 aaKnown RBP5.34□□□□□ -1.55
TMOD3-207ENST00000560549 C4BPAP04003 597 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms