RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 ARNTL2Q8WYA1 636 aa7.32□□□□□ -1.24
IRF9-208ENST00000560311 PPP1R16BQ96T49 567 aa7.32□□□□□ -1.24
IRF9-208ENST00000560311 NAP1L4Q99733 375 aaKnown RBP7.32□□□□□ -1.24
IRF9-208ENST00000560311 NUCKS1Q9H1E3 243 aaKnown RBP7.32□□□□□ -1.24
IRF9-208ENST00000560311 CERS4Q9HA82 394 aa7.32□□□□□ -1.24
IRF9-208ENST00000560311 CEP131Q9UPN4 1083 aa7.32□□□□□ -1.24
IRF9-208ENST00000560311 LIMCH1Q9UPQ0 1083 aa7.32□□□□□ -1.24
IRF9-208ENST00000560311 MYH7BA7E2Y1 1941 aa7.32□□□□□ -1.24
IRF9-208ENST00000560311 XIRP2A4UGR9 3374 aa7.32□□□□□ -1.24
IRF9-208ENST00000560311 KDM3AQ9Y4C1 1321 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 LINC01553A4QN01 128 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 ZNF862O60290 1169 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 IGFBP4P22692 258 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 KLRC1P26715 233 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 CHRNA4P43681 627 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 HTRA4P83105 476 aaPredicted RBP7.31□□□□□ -1.24
IRF9-208ENST00000560311 PPP2R5CQ13362 524 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 DOC2BQ14184 412 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 RABEP1Q15276 862 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 KRT40Q6A162 431 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 TRMT1LQ7Z2T5 733 aaKnown RBP7.31□□□□□ -1.24
IRF9-208ENST00000560311 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.31□□□□□ -1.24
IRF9-208ENST00000560311 MICALL1Q8N3F8 863 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 LRRC71Q8N4P6 559 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 LINC01465Q8N7H1 131 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 BANK1Q8NDB2 785 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 GDPD5Q8WTR4 605 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 YME1L1Q96TA2 773 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 RAD9AQ99638 391 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 AGO3Q9H9G7 860 aaKnown RBP7.31□□□□□ -1.24
IRF9-208ENST00000560311 UPF2Q9HAU5 1272 aaKnown RBP7.31□□□□□ -1.24
IRF9-208ENST00000560311 SH2B1Q9NRF2 756 aaPredicted RBP7.31□□□□□ -1.24
IRF9-208ENST00000560311 MTUS1Q9ULD2 1270 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 GINS2Q9Y248 185 aa7.31□□□□□ -1.24
IRF9-208ENST00000560311 ADGRA3Q8IWK6 1321 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 A0A1W2PRU2 124 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 TMEM150BA6NC51 233 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 BTBD18B2RXH4 712 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 EML1O00423 815 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 TBX3O15119 743 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 NEMFO60524 1076 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 VTNP04004 478 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 THBS1P07996 1170 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 HOXB4P17483 251 aaPredicted RBP7.3□□□□□ -1.24
IRF9-208ENST00000560311 HMGN5P82970 282 aaKnown RBP7.3□□□□□ -1.24
IRF9-208ENST00000560311 GUCY1B3Q02153 619 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 KIZQ2M2Z5 673 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 TMEM266Q2M3C6 531 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 MTERF2Q49AM1 385 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 PLA2G4FQ68DD2 849 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 NCAPH2Q6IBW4 605 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 KIAA0319LQ8IZA0 1049 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 NME8Q8N427 588 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 METTL13Q8N6R0 699 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 SLC17A8Q8NDX2 589 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 TMEM40Q8WWA1 233 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 C8orf76Q96K31 380 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 ZSCAN31Q96LW9 406 aaPredicted RBP7.3□□□□□ -1.24
IRF9-208ENST00000560311 FAM20AQ96MK3 541 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 MAP7D2Q96T17 732 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 OSMRQ99650 979 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 LLPHQ9BRT6 129 aaKnown RBP7.3□□□□□ -1.24
IRF9-208ENST00000560311 LXNQ9BS40 222 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 CELF4Q9BZC1 486 aaKnown RBP7.3□□□□□ -1.24
IRF9-208ENST00000560311 RC3H2Q9HBD1 1191 aaKnown RBP7.3□□□□□ -1.24
IRF9-208ENST00000560311 AKT3Q9Y243 479 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 INSL6Q9Y581 213 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 SQORQ9Y6N5 450 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 MICAL3Q7RTP6 2002 aa7.3□□□□□ -1.24
IRF9-208ENST00000560311 VCANP13611 3396 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 ESPNB1AK53 854 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 RFXAPO00287 272 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 MAGEB2O15479 319 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 MARCH6O60337 910 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 RPS6KA5O75582 802 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 GPC1P35052 558 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 ERVK-21P61565 698 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 PSMC5P62195 406 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 SPIRE1Q08AE8 756 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 TBC1D8BQ0IIM8 1120 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 GRB10Q13322 594 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 SAFBQ15424 915 aaKnown RBP eCLIP7.29□□□□□ -1.24
IRF9-208ENST00000560311 CALCRLQ16602 461 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 XKR3Q5GH77 459 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 FAM228AQ86W67 206 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 SLFN12Q8IYM2 578 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 FAM184AQ8NB25 1140 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 PPM1EQ8WY54 764 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 HAS1Q92839 578 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 TOP1MTQ969P6 601 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 TBC1D32Q96NH3 1257 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 SCLT1Q96NL6 688 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 TGS1Q96RS0 853 aaKnown RBP7.29□□□□□ -1.24
IRF9-208ENST00000560311 C17orf80Q9BSJ5 609 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 FTHL17Q9BXU8 183 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 TMX1Q9H3N1 280 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 ERVK-5Q9HDB9 667 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 NRBP2Q9NSY0 501 aa7.29□□□□□ -1.24
IRF9-208ENST00000560311 WRAP73Q9P2S5 460 aaPredicted RBP7.29□□□□□ -1.24
IRF9-208ENST00000560311 PADI3Q9ULW8 664 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms