RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 PPP1R16BQ96T49 567 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 DUSP9Q99956 384 aaKnown RBP10.33□□□□□ -0.76
HERC1-206ENST00000559996 HAPLN2Q9GZV7 340 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 FAM49AQ9H0Q0 323 aaPredicted RBP10.33□□□□□ -0.76
HERC1-206ENST00000559996 DNAJC25Q9H1X3 360 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 C11orf49Q9H6J7 331 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 MRPL44Q9H9J2 332 aaKnown RBP10.33□□□□□ -0.76
HERC1-206ENST00000559996 KMT5AQ9NQR1 393 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 TBX20Q9UMR3 447 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 AKT3Q9Y243 479 aa10.33□□□□□ -0.76
HERC1-206ENST00000559996 DENND3A2RUS2 1198 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 TRIM49BA6NDI0 452 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 TISP43B9A030 160 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 ANKRD63C9JTQ0 380 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 GCNT3O95395 438 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 PIGRP01833 764 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 CCDC192P0DO97 292 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 CKBP12277 381 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 ADSSP30520 456 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 HOXA11P31270 313 aaPredicted RBP10.32□□□□□ -0.76
HERC1-206ENST00000559996 TLE2Q04725 743 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 DMP1Q13316 513 aaPredicted RBP10.32□□□□□ -0.76
HERC1-206ENST00000559996 MBTPS1Q14703 1052 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 PPP2R5AQ15172 486 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 STX1AQ16623 288 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 FAM187BQ17R55 369 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 KNOP1Q1ED39 458 aaKnown RBP10.32□□□□□ -0.76
HERC1-206ENST00000559996 TRIM60Q495X7 471 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 CT47A1Q5JQC4 288 aaPredicted RBP10.32□□□□□ -0.76
HERC1-206ENST00000559996 ZNF618Q5T7W0 954 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 TTI2Q6NXR4 508 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 ZNF410Q86VK4 478 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 MAP4K3Q8IVH8 894 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 DHX40Q8IX18 779 aaKnown RBP10.32□□□□□ -0.76
HERC1-206ENST00000559996 ZC3H3Q8IXZ2 948 aaKnown RBP10.32□□□□□ -0.76
HERC1-206ENST00000559996 TMEM174Q8WUU8 243 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 ABHD8Q96I13 439 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 IFT74Q96LB3 600 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 CELF4Q9BZC1 486 aaKnown RBP10.32□□□□□ -0.76
HERC1-206ENST00000559996 PTPRHQ9HD43 1115 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 ANO10Q9NW15 660 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 DMAC2Q9NW81 257 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 TRAF3IP3Q9Y228 551 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 CDY2AQ9Y6F7 541 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 STYXL1Q9Y6J8 313 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 UMODL1Q5DID0 1318 aa10.32□□□□□ -0.76
HERC1-206ENST00000559996 LRRIQ4A6NIV6 560 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 K7ENM7 598 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 K7ERI5 159 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 B4GALT5O43286 388 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 DARSP14868 501 aaKnown RBP10.31□□□□□ -0.76
HERC1-206ENST00000559996 FGFR4P22455 802 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 PROZP22891 400 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 EIF4BP23588 611 aaKnown RBP10.31□□□□□ -0.76
HERC1-206ENST00000559996 CCNE1P24864 410 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 ITGB8P26012 769 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 ERCC5P28715 1186 aaPredicted RBP10.31□□□□□ -0.76
HERC1-206ENST00000559996 CRYBB1P53674 252 aaPredicted RBP10.31□□□□□ -0.76
HERC1-206ENST00000559996 SMTNP53814 917 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 STX17P56962 302 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 MCCD1P59942 119 aaPredicted RBP10.31□□□□□ -0.76
HERC1-206ENST00000559996 MRPS6P82932 125 aaKnown RBP10.31□□□□□ -0.76
HERC1-206ENST00000559996 CDC42EP1Q00587 391 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 FOXR2Q6PJQ5 311 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 SRGAP1Q7Z6B7 1085 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 NECAB2Q7Z6G3 386 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 IRF2BP1Q8IU81 584 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 NELFCDQ8IXH7 590 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 MYOCDQ8IZQ8 938 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 SLC17A8Q8NDX2 589 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 ZSWIM2Q8NEG5 633 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 ENOX1Q8TC92 643 aaKnown RBP10.31□□□□□ -0.76
HERC1-206ENST00000559996 DHTKD1Q96HY7 919 aaPredicted RBP10.31□□□□□ -0.76
HERC1-206ENST00000559996 ZBTB45Q96K62 511 aaPredicted RBP10.31□□□□□ -0.76
HERC1-206ENST00000559996 NLRP4Q96MN2 994 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 MAP7D2Q96T17 732 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 OSMRQ99650 979 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 BPIFA3Q9BQP9 254 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 GTPBP4Q9BZE4 634 aaKnown RBP10.31□□□□□ -0.76
HERC1-206ENST00000559996 RBSNQ9H1K0 784 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 AGO3Q9H9G7 860 aaKnown RBP10.31□□□□□ -0.76
HERC1-206ENST00000559996 KCNG1Q9UIX4 513 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 NOC2LQ9Y3T9 749 aaKnown RBP10.31□□□□□ -0.76
HERC1-206ENST00000559996 ALPK3Q96L96 1907 aa10.31□□□□□ -0.76
HERC1-206ENST00000559996 TRIM43BA6NCK2 446 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 ACKR2O00590 384 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 PDXKO00764 312 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 PQBP1O60828 265 aaKnown RBP10.3□□□□□ -0.76
HERC1-206ENST00000559996 THPOP40225 353 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 EFNA5P52803 228 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 ALCAMQ13740 583 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 TFDP1Q14186 410 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 NFIL3Q16649 462 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 TCTN1Q2MV58 587 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 FBXO47Q5MNV8 452 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 FAM228AQ86W67 206 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 DEPTORQ8TB45 409 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 NELFBQ8WX92 580 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 P2RX5Q93086 422 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 CCDC47Q96A33 483 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms