RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 C8orf76Q96K31 380 aa13.99□□□□□ -0.17
SNX1-209ENST00000559961 ZSCAN31Q96LW9 406 aaPredicted RBP13.99□□□□□ -0.17
SNX1-209ENST00000559961 APOL5Q9BWW9 433 aa13.99□□□□□ -0.17
SNX1-209ENST00000559961 TSHZ2Q9NRE2 1034 aa13.99□□□□□ -0.17
SNX1-209ENST00000559961 TBC1D13Q9NVG8 400 aa13.99□□□□□ -0.17
SNX1-209ENST00000559961 DPP7Q9UHL4 492 aa13.99□□□□□ -0.17
SNX1-209ENST00000559961 NOL7Q9UMY1 257 aaKnown RBP13.99□□□□□ -0.17
SNX1-209ENST00000559961 C2orf71A6NGG8 1288 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 LOC730098B7Z3J9 87 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 OFD1O75665 1012 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 LYPLA2O95372 231 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 GLP2RO95838 553 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 GALTP07902 379 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 FDPSP14324 419 aaKnown RBP13.98□□□□□ -0.17
SNX1-209ENST00000559961 MCM7P33993 719 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 MTHFRP42898 656 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 HMGN5P82970 282 aaKnown RBP13.98□□□□□ -0.17
SNX1-209ENST00000559961 POU5F1BQ06416 359 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 ATAT1Q5SQI0 421 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 SUGP1Q8IWZ8 645 aaKnown RBP13.98□□□□□ -0.17
SNX1-209ENST00000559961 ZNF579Q8NAF0 562 aaKnown RBP13.98□□□□□ -0.17
SNX1-209ENST00000559961 LLPHQ9BRT6 129 aaKnown RBP13.98□□□□□ -0.17
SNX1-209ENST00000559961 TMEM175Q9BSA9 504 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 KCNH6Q9H252 994 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 KIF3AQ9Y496 699 aa13.98□□□□□ -0.17
SNX1-209ENST00000559961 EVPLQ92817 2033 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 NCLP19338 710 aaKnown RBP13.97□□□□□ -0.17
SNX1-209ENST00000559961 KLRC2P26717 231 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 RBM25P49756 843 aaKnown RBP13.97□□□□□ -0.17
SNX1-209ENST00000559961 PTENP60484 403 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 ORC2Q13416 577 aaPredicted RBP13.97□□□□□ -0.17
SNX1-209ENST00000559961 EARS2Q5JPH6 523 aaKnown RBP13.97□□□□□ -0.17
SNX1-209ENST00000559961 KIAA1841Q6NSI8 718 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 MRPL10Q7Z7H8 261 aaKnown RBP13.97□□□□□ -0.17
SNX1-209ENST00000559961 CABP7Q86V35 215 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 ZBTB8OSQ8IWT0 167 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 MCPH1Q8NEM0 835 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 PBXIP1Q96AQ6 731 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 NACC1Q96RE7 527 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 HSD17B14Q9BPX1 270 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 ADAM7Q9H2U9 754 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 NRDE2Q9H7Z3 1164 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 C11orf16Q9NQ32 467 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 MRPL17Q9NRX2 175 aaKnown RBP13.97□□□□□ -0.17
SNX1-209ENST00000559961 WRAP73Q9P2S5 460 aaPredicted RBP13.97□□□□□ -0.17
SNX1-209ENST00000559961 STK24Q9Y6E0 443 aa13.97□□□□□ -0.17
SNX1-209ENST00000559961 FAM205CA6NFA0 338 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 JAK2O60674 1132 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 DTNBO60941 627 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 CLASP2O75122 1294 aaKnown RBP13.96□□□□□ -0.17
SNX1-209ENST00000559961 POMCP01189 267 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 CTSAP10619 480 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 RBM10P98175 930 aaKnown RBP13.96□□□□□ -0.17
SNX1-209ENST00000559961 GUCY1B3Q02153 619 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 CCDC83Q8IWF9 413 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 SUSD6Q92537 303 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 TNFRSF25Q93038 417 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 PRRX2Q99811 253 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 COLEC11Q9BWP8 271 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 RAB34Q9BZG1 259 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 ZBP1Q9H171 429 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 CSRNP2Q9H175 543 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 FOXP1Q9H334 677 aaPredicted RBP13.96□□□□□ -0.17
SNX1-209ENST00000559961 TUFT1Q9NNX1 390 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 SH2B1Q9NRF2 756 aaPredicted RBP13.96□□□□□ -0.17
SNX1-209ENST00000559961 DBR1Q9UK59 544 aaKnown RBP13.96□□□□□ -0.17
SNX1-209ENST00000559961 HCFC2Q9Y5Z7 792 aa13.96□□□□□ -0.17
SNX1-209ENST00000559961 MUC3AQ02505 3323 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 ARHGEF35A5YM69 484 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 LRRIQ4A6NIV6 560 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 ZBTB39O15060 712 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 USO1O60763 962 aaKnown RBP13.95□□□□□ -0.18
SNX1-209ENST00000559961 LARGE1O95461 756 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 URODP06132 367 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 HOXA11P31270 313 aaPredicted RBP13.95□□□□□ -0.18
SNX1-209ENST00000559961 OR1G1P47890 313 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 SLC11A1P49279 550 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 ZXDAP98168 799 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 SPIRE1Q08AE8 756 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 RARS2Q5T160 578 aaKnown RBP13.95□□□□□ -0.18
SNX1-209ENST00000559961 HAUS3Q68CZ6 603 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 AGMOQ6ZNB7 445 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 TRIM67Q6ZTA4 783 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 APBB1IPQ7Z5R6 666 aaPredicted RBP13.95□□□□□ -0.18
SNX1-209ENST00000559961 VN1R2Q8NFZ6 395 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 PIGOQ8TEQ8 1089 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 ACSF2Q96CM8 615 aaPredicted RBP13.95□□□□□ -0.18
SNX1-209ENST00000559961 RPS6KC1Q96S38 1066 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 APOL6Q9BWW8 343 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 NFKBIZQ9BYH8 718 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 POLR3FQ9H1D9 316 aaPredicted RBP13.95□□□□□ -0.18
SNX1-209ENST00000559961 C2orf40Q9H1Z8 148 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 S1PR5Q9H228 398 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 MINDY3Q9H8M7 445 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 DAXXQ9UER7 740 aaPredicted RBP13.95□□□□□ -0.18
SNX1-209ENST00000559961 GIT1Q9Y2X7 761 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 IPPQ9Y573 584 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 IRAK3Q9Y616 596 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 BDP1A6H8Y1 2624 aa13.95□□□□□ -0.18
SNX1-209ENST00000559961 BRWD1Q9NSI6 2320 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms