RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SFMBT2Q5VUG0 894 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 SYT10Q6XYQ8 523 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 CBWD2Q8IUF1 395 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 PLEKHO2Q8TD55 490 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 POMGNT1Q8WZA1 660 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 CCDC42Q96M95 316 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 MFSD14AQ96MC6 490 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 RNPEPQ9H4A4 650 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 DAAM1Q9Y4D1 1078 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 PHLPP2Q6ZVD8 1323 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 PLXNB2O15031 1838 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 ARID2Q68CP9 1835 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 ZNF236Q9UL36 1845 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 LCA5LO95447 670 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 SERPING1P05155 500 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 ADRB2P07550 413 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 PLEKP08567 350 aaPredicted RBP13.82□□□□□ -0.2
USP3-213ENST00000559711 EIF4A3P38919 411 aaKnown RBP13.82□□□□□ -0.2
USP3-213ENST00000559711 ARHGAP25P42331 645 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 EFNA5P52803 228 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 DLG4P78352 724 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 ASTE1Q2TB18 679 aaPredicted RBP13.82□□□□□ -0.2
USP3-213ENST00000559711 CDCA2Q69YH5 1023 aaPredicted RBP13.82□□□□□ -0.2
USP3-213ENST00000559711 LMO3Q8TAP4 145 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 TMC2Q8TDI7 906 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 PARD3BQ8TEW8 1205 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 PSPC1Q8WXF1 523 aaKnown RBP13.82□□□□□ -0.2
USP3-213ENST00000559711 ZNF592Q92610 1267 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 BICD1Q96G01 975 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 C16orf70Q9BSU1 422 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 KIAA1586Q9HCI6 787 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 USP20Q9Y2K6 914 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 FHOD1Q9Y613 1164 aa13.82□□□□□ -0.2
USP3-213ENST00000559711 MYH9P35579 1960 aaKnown RBP13.81□□□□□ -0.2
USP3-213ENST00000559711 A0A0U1RQJ8 604 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 GOLGA8IPA6NC78 632 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 GOLGA8JA6NMD2 632 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 KIF3CO14782 793 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 IGHA2P01877 340 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 LIG4P49917 911 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 JAM2P57087 298 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 MYL7Q01449 175 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 PPP3CAQ08209 521 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 LAMTOR4Q0VGL1 99 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 SLC9C1Q4G0N8 1177 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 SLFN12LQ6IEE8 588 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 GPD1LQ8N335 351 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 EHBP1Q8NDI1 1231 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 SMC1BQ8NDV3 1235 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 MYRIPQ8NFW9 859 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 ATRIPQ8WXE1 791 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 SAAL1Q96ER3 474 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 SUGCTQ9HAC7 445 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 GPBP1L1Q9HC44 474 aaPredicted RBP13.81□□□□□ -0.2
USP3-213ENST00000559711 LZTFL1Q9NQ48 299 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 GJD2Q9UKL4 321 aa13.81□□□□□ -0.2
USP3-213ENST00000559711 ZHX1Q9UKY1 873 aaPredicted RBP13.81□□□□□ -0.2
USP3-213ENST00000559711 ASAP2O43150 1006 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 EXTL3O43909 919 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 C22orf31O95567 290 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 INSRRP14616 1297 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 CYP24A1Q07973 514 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 CETN1Q12798 172 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 CRHR2Q13324 411 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 HSP90AA2PQ14568 343 aaPredicted RBP13.8□□□□□ -0.2
USP3-213ENST00000559711 OLFML2BQ68BL8 750 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 IRF2BP2Q7Z5L9 587 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 LRRC71Q8N4P6 559 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 INTS2Q9H0H0 1204 aaKnown RBP13.8□□□□□ -0.2
USP3-213ENST00000559711 CCDC113Q9H0I3 377 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 HAUS4Q9H6D7 363 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 FLRT1Q9NZU1 646 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 SUCLA2Q9P2R7 463 aaPredicted RBP13.8□□□□□ -0.2
USP3-213ENST00000559711 DNAI1Q9UI46 699 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 MCM3APO60318 1980 aa13.8□□□□□ -0.2
USP3-213ENST00000559711 TMEM88BA6NKF7 163 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 RIOK3O14730 519 aaKnown RBP13.79□□□□□ -0.2
USP3-213ENST00000559711 ZNF263O14978 683 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 FANCGO15287 622 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 MAGEB2O15479 319 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 CA12O43570 354 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 IPO7O95373 1038 aaKnown RBP13.79□□□□□ -0.2
USP3-213ENST00000559711 MMP3P08254 477 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 ZNF865P0CJ78 1059 aaPredicted RBP13.79□□□□□ -0.2
USP3-213ENST00000559711 GTF2H1P32780 548 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 RGS2P41220 211 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 KIF11P52732 1056 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 GNG11P61952 73 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 TNFAIP2Q03169 654 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 RAPGEF1Q13905 1077 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 EPC2Q52LR7 807 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 ARHGAP29Q52LW3 1261 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 IQCEQ6IPM2 695 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 EFCAB12Q6NXP0 572 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 ZPBP2Q6X784 338 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 USP37Q86T82 979 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 LINC01465Q8N7H1 131 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 OR6J1Q8NGC5 347 aa13.79□□□□□ -0.2
USP3-213ENST00000559711 TRAPPC12Q8WVT3 735 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms