RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ADAM2Q99965 735 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 TSPYL2Q9H2G4 693 aaPredicted RBP19.21■□□□□ 0.67
TPM1-214ENST00000558544 FZD8Q9H461 694 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 SEL1LQ9UBV2 794 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 KCNG1Q9UIX4 513 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 USP20Q9Y2K6 914 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 K7ERI5 159 aa19.2■□□□□ 0.66
TPM1-214ENST00000558544 ENPP3O14638 875 aa19.2■□□□□ 0.66
TPM1-214ENST00000558544 MAPTP10636 758 aaKnown RBP19.2■□□□□ 0.66
TPM1-214ENST00000558544 IBSPP21815 317 aaPredicted RBP19.2■□□□□ 0.66
TPM1-214ENST00000558544 FAM187BQ17R55 369 aa19.2■□□□□ 0.66
TPM1-214ENST00000558544 KANK3Q6NY19 840 aa19.2■□□□□ 0.66
TPM1-214ENST00000558544 HAUS6Q7Z4H7 955 aa19.2■□□□□ 0.66
TPM1-214ENST00000558544 CCDC34Q96HJ3 373 aa19.2■□□□□ 0.66
TPM1-214ENST00000558544 PRIMPOLQ96LW4 560 aa19.2■□□□□ 0.66
TPM1-214ENST00000558544 TIGD1Q96MW7 591 aa19.2■□□□□ 0.66
TPM1-214ENST00000558544 TMEM134Q9H6X4 195 aa19.2■□□□□ 0.66
TPM1-214ENST00000558544 MRPL44Q9H9J2 332 aaKnown RBP19.2■□□□□ 0.66
TPM1-214ENST00000558544 DACT1Q9NYF0 836 aa19.2■□□□□ 0.66
TPM1-214ENST00000558544 SLC4A7Q9Y6M7 1214 aa19.2■□□□□ 0.66
TPM1-214ENST00000558544 CNTNAP2Q9UHC6 1331 aa19.2■□□□□ 0.66
TPM1-214ENST00000558544 TTLL13PA6NNM8 815 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 H0YCG3 227 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 ACKR2O00590 384 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 AMHP03971 560 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 MYL1P05976 194 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 ARF4P18085 180 aaPredicted RBP19.19■□□□□ 0.66
TPM1-214ENST00000558544 HOXA11P31270 313 aaPredicted RBP19.19■□□□□ 0.66
TPM1-214ENST00000558544 PNOCQ13519 176 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 PRPF4BQ13523 1007 aaKnown RBP19.19■□□□□ 0.66
TPM1-214ENST00000558544 POSTNQ15063 836 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 TMEM132AQ24JP5 1023 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 TWF2Q6IBS0 349 aaKnown RBP19.19■□□□□ 0.66
TPM1-214ENST00000558544 TMCO2Q7Z6W1 182 aaPredicted RBP19.19■□□□□ 0.66
TPM1-214ENST00000558544 CDR2LQ86X02 465 aaPredicted RBP19.19■□□□□ 0.66
TPM1-214ENST00000558544 MYOCDQ8IZQ8 938 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 HPS3Q969F9 1004 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 FGFBP2Q9BYJ0 223 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 CHST12Q9NRB3 414 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 OLFML3Q9NRN5 406 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 RGS18Q9NS28 235 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 FNDC1Q4ZHG4 1894 aaPredicted RBP19.19■□□□□ 0.66
TPM1-214ENST00000558544 KLRC4O43908 158 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 AXLP30530 894 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 NCBP1Q09161 790 aaKnown RBP19.19■□□□□ 0.66
TPM1-214ENST00000558544 DPYDQ12882 1025 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 STRN3Q13033 797 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 ZC2HC1CQ53FD0 456 aaPredicted RBP19.19■□□□□ 0.66
TPM1-214ENST00000558544 NOTUMQ6P988 496 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 SLC17A8Q8NDX2 589 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 TRIOBPQ9H2D6 2365 aa19.19■□□□□ 0.66
TPM1-214ENST00000558544 PVALEFA0A1B0GWK0 134 aa19.18■□□□□ 0.66
TPM1-214ENST00000558544 GCNT3O95395 438 aa19.18■□□□□ 0.66
TPM1-214ENST00000558544 MYBP10242 640 aa19.18■□□□□ 0.66
TPM1-214ENST00000558544 CASP5P51878 434 aa19.18■□□□□ 0.66
TPM1-214ENST00000558544 NT5DC1Q5TFE4 455 aa19.18■□□□□ 0.66
TPM1-214ENST00000558544 ZNF720Q7Z2F6 126 aa19.18■□□□□ 0.66
TPM1-214ENST00000558544 SLC9A7Q96T83 725 aa19.18■□□□□ 0.66
TPM1-214ENST00000558544 MRPL4Q9BYD3 311 aaKnown RBP19.18■□□□□ 0.66
TPM1-214ENST00000558544 C1orf112Q9NSG2 853 aa19.18■□□□□ 0.66
TPM1-214ENST00000558544 EXOC1Q9NV70 894 aa19.18■□□□□ 0.66
TPM1-214ENST00000558544 C9IYK1 514 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 UPP2O95045 317 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 RPN1P04843 607 aaKnown RBP19.17■□□□□ 0.66
TPM1-214ENST00000558544 ATP2A2P16615 1042 aaKnown RBP19.17■□□□□ 0.66
TPM1-214ENST00000558544 SARSP49591 514 aaKnown RBP19.17■□□□□ 0.66
TPM1-214ENST00000558544 GTF2BQ00403 316 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 EHHADHQ08426 723 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 KMT5BQ4FZB7 885 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 FAM26FQ5R3K3 315 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 FAM109BQ6ICB4 259 aaPredicted RBP19.17■□□□□ 0.66
TPM1-214ENST00000558544 FAM117BQ6P1L5 589 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 FAM43BQ6ZT52 329 aaPredicted RBP19.17■□□□□ 0.66
TPM1-214ENST00000558544 SLC24A5Q71RS6 500 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 GLIS3Q8NEA6 775 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 ERCC4Q92889 916 aaPredicted RBP19.17■□□□□ 0.66
TPM1-214ENST00000558544 KCNN1Q92952 543 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 TARS2Q9BW92 718 aaKnown RBP19.17■□□□□ 0.66
TPM1-214ENST00000558544 ST6GALNAC4Q9H4F1 302 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 PDZD7Q9H5P4 517 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 TBX20Q9UMR3 447 aa19.17■□□□□ 0.66
TPM1-214ENST00000558544 TRIP11Q15643 1979 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 A0A1B0GUA9 196 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 A0A1W2PPC1 479 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 GRXCR1A8MXD5 290 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 N4BP3O15049 544 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 PPP1R37O75864 691 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 SCP2P22307 547 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 UBXN11Q5T124 520 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 ATF7IP2Q5U623 682 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 EEF1DP3Q658K8 133 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 MAP4K3Q8IVH8 894 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 CCDC51Q96ER9 411 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 BICD1Q96G01 975 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 ACO2Q99798 780 aaKnown RBP19.16■□□□□ 0.66
TPM1-214ENST00000558544 EIF2AQ9BY44 585 aaKnown RBP19.16■□□□□ 0.66
TPM1-214ENST00000558544 FAM105AQ9NUU6 356 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 HOOK1Q9UJC3 728 aaKnown RBP19.16■□□□□ 0.66
TPM1-214ENST00000558544 KIAA1671Q9BY89 1806 aa19.16■□□□□ 0.66
TPM1-214ENST00000558544 CITO14578 2027 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms